RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KIAA1671Q9BY89 1806 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 MYO7AQ13402 2215 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 HOXA2O43364 376 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 TBX10O75333 385 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 DARSP14868 501 aaKnown RBP23.66■■□□□ 1.38
VSX1-206ENST00000444511 UBE3AQ05086 875 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 ADAM15Q13444 863 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 CSPP1Q1MSJ5 1256 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 ADGRD2Q7Z7M1 963 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 THNSL1Q8IYQ7 743 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 MICAL1Q8TDZ2 1067 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 PHF20Q9BVI0 1012 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 NIFKQ9BYG3 293 aaKnown RBP23.66■■□□□ 1.38
VSX1-206ENST00000444511 TMEM117Q9H0C3 514 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 HCSTQ9UBK5 93 aa23.66■■□□□ 1.38
VSX1-206ENST00000444511 STK36Q9NRP7 1315 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 ATG2AQ2TAZ0 1938 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 FGF18O76093 207 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 LAG3P18627 525 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 NRIP1P48552 1158 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 DNM2P50570 870 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 ZP2Q05996 745 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 RBM23Q86U06 439 aaKnown RBP23.65■■□□□ 1.38
VSX1-206ENST00000444511 ADHFE1Q8IWW8 467 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 ABI1Q8IZP0 508 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 COLGALT1Q8NBJ5 622 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 CD207Q9UJ71 328 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 TPCN1Q9ULQ1 816 aa23.65■■□□□ 1.38
VSX1-206ENST00000444511 TMEM150BA6NC51 233 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 FAM86C2PA6NEL3 165 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 DDX11L8A8MPP1 907 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 MBTPS2O43462 519 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 SLC37A4O43826 429 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 PFKFB2O60825 505 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 GPR37L1O60883 481 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 CDC42EP1Q00587 391 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 DRP2Q13474 957 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 SMAD4Q13485 552 aaKnown RBP23.64■■□□□ 1.37
VSX1-206ENST00000444511 SMAD2Q15796 467 aaKnown RBP23.64■■□□□ 1.37
VSX1-206ENST00000444511 NEK8Q86SG6 692 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 EFHBQ8N7U6 833 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 RNF169Q8NCN4 708 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 SH2D3AQ9BRG2 576 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 TLR9Q9NR96 1032 aa23.64■■□□□ 1.37
VSX1-206ENST00000444511 STBD1O95210 358 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 ALADP13716 330 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 FGFR4P22455 802 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 ANAPC15P60006 121 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 PSMC5P62195 406 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 ANKRD1Q15327 319 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 ECHDC2Q86YB7 292 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 FAM20AQ96MK3 541 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 GCOM2Q9BZD3 368 aaPredicted RBP23.63■■□□□ 1.37
VSX1-206ENST00000444511 CWH43Q9H720 699 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 TLE6Q9H808 572 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 PCDHGC5Q9Y5F6 944 aa23.63■■□□□ 1.37
VSX1-206ENST00000444511 GCFC2P16383 781 aaKnown RBP23.62■■□□□ 1.37
VSX1-206ENST00000444511 PPP4R3AQ6IN85 833 aa23.62■■□□□ 1.37
VSX1-206ENST00000444511 LRRC43Q8N309 656 aa23.62■■□□□ 1.37
VSX1-206ENST00000444511 CASD1Q96PB1 797 aa23.62■■□□□ 1.37
VSX1-206ENST00000444511 POP1Q99575 1024 aaKnown RBP23.62■■□□□ 1.37
VSX1-206ENST00000444511 C11orf16Q9NQ32 467 aa23.62■■□□□ 1.37
VSX1-206ENST00000444511 GJB4Q9NTQ9 266 aa23.62■■□□□ 1.37
VSX1-206ENST00000444511 PPP4R2Q9NY27 417 aa23.62■■□□□ 1.37
VSX1-206ENST00000444511 DACT1Q9NYF0 836 aa23.62■■□□□ 1.37
VSX1-206ENST00000444511 IGKV6-21A0A0C4DH24 114 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 MARCH6O60337 910 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 CCNT1O60563 726 aaKnown RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 DTNBO60941 627 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 CSDE1O75534 798 aaKnown RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 PPP2R5CQ13362 524 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 PDE12Q6L8Q7 609 aaKnown RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 PIK3AP1Q6ZUJ8 805 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 WASF1Q92558 559 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 MSLNLQ96KJ4 702 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 CEP89Q96ST8 783 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 NAP1L4Q99733 375 aaKnown RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 JPH2Q9BR39 696 aaPredicted RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 KCNMB3Q9NPA1 279 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 RNF19AQ9NV58 838 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 SUCLA2Q9P2R7 463 aaPredicted RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 ORC3Q9UBD5 711 aaPredicted RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 PUF60Q9UHX1 559 aaKnown RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 HCN4Q9Y3Q4 1203 aa23.61■■□□□ 1.37
VSX1-206ENST00000444511 FNDC1Q4ZHG4 1894 aaPredicted RBP23.61■■□□□ 1.37
VSX1-206ENST00000444511 A0A087WZ62 844 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 A0A0U1RQF3 1178 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 C19orf67A6NJJ6 358 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 EML1O00423 815 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 DKC1O60832 514 aaKnown RBP eCLIP23.6■■□□□ 1.37
VSX1-206ENST00000444511 MAFO75444 373 aaPredicted RBP23.6■■□□□ 1.37
VSX1-206ENST00000444511 SFPQP23246 707 aaKnown RBP eCLIP23.6■■□□□ 1.37
VSX1-206ENST00000444511 QARSP47897 775 aaKnown RBP23.6■■□□□ 1.37
VSX1-206ENST00000444511 AK2P54819 239 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 ERVFC1P60507 584 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 ANO5Q75V66 913 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 RHPN2Q8IUC4 686 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 OXER1Q8TDS5 423 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 ZNF558Q96NG5 402 aa23.6■■□□□ 1.37
VSX1-206ENST00000444511 FDXACB1Q9BRP7 624 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms