RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KLRC1P26715 233 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 HOXC8P31273 242 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 MKRN4PQ13434 485 aaPredicted RBP23.32■■□□□ 1.32
VPS13B-204ENST00000441350 ODR4Q5SWX8 454 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 LMBR1Q8WVP7 490 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 FGFBP2Q9BYJ0 223 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 RNF208Q9H0X6 261 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 POLR3FQ9H1D9 316 aaPredicted RBP23.32■■□□□ 1.32
VPS13B-204ENST00000441350 SETD4Q9NVD3 440 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 TBC1D7Q9P0N9 293 aa23.32■■□□□ 1.32
VPS13B-204ENST00000441350 MYCP01106 439 aaPredicted RBP23.31■■□□□ 1.32
VPS13B-204ENST00000441350 PRCPP42785 496 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 ACLYP53396 1101 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 CHMP4BP1P59074 171 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 ADAM17P78536 824 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 IER5Q5VY09 327 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 MTHFD1LQ6UB35 978 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 LINC01465Q8N7H1 131 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 GLIS3Q8NEA6 775 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 BSNDQ8WZ55 320 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 DEFB118Q96PH6 123 aa23.31■■□□□ 1.32
VPS13B-204ENST00000441350 MOXD2PA6NHM9 499 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 CABYRO75952 493 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 DRP2Q13474 957 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 CT47A1Q5JQC4 288 aaPredicted RBP23.3■■□□□ 1.32
VPS13B-204ENST00000441350 EPM2AIP1Q7L775 607 aaPredicted RBP23.3■■□□□ 1.32
VPS13B-204ENST00000441350 ADSSL1Q8N142 457 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 PPP1R13LQ8WUF5 828 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 TCP11Q8WWU5 503 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 ZBTB10Q96DT7 871 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 MRPL44Q9H9J2 332 aaKnown RBP23.3■■□□□ 1.32
VPS13B-204ENST00000441350 SUGCTQ9HAC7 445 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 PRDM10Q9NQV6 1147 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 HDAC6Q9UBN7 1215 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 DACH1Q9UI36 760 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 EVPLQ92817 2033 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 MBLAC1A4D2B0 266 aaPredicted RBP23.3■■□□□ 1.32
VPS13B-204ENST00000441350 MAPTP10636 758 aaKnown RBP23.3■■□□□ 1.32
VPS13B-204ENST00000441350 HIC1Q14526 733 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 NBPF20Q3BBV1 942 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 EFCAB12Q6NXP0 572 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 FAM178BQ8IXR5 827 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 LRRC71Q8N4P6 559 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 RETREG2Q8NC44 543 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 SPIRE2Q8WWL2 714 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 BPIFA3Q9BQP9 254 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 NTPCRQ9BSD7 190 aaKnown RBP23.3■■□□□ 1.32
VPS13B-204ENST00000441350 NAT10Q9H0A0 1025 aaKnown RBP23.3■■□□□ 1.32
VPS13B-204ENST00000441350 OGDHLQ9ULD0 1010 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 MAPK8IP1Q9UQF2 711 aa23.3■■□□□ 1.32
VPS13B-204ENST00000441350 ZNF165P49910 485 aa23.29■■□□□ 1.32
VPS13B-204ENST00000441350 CASP5P51878 434 aa23.29■■□□□ 1.32
VPS13B-204ENST00000441350 PEX3P56589 373 aa23.29■■□□□ 1.32
VPS13B-204ENST00000441350 ZNF720Q7Z2F6 126 aa23.29■■□□□ 1.32
VPS13B-204ENST00000441350 GUF1Q8N442 669 aaKnown RBP23.29■■□□□ 1.32
VPS13B-204ENST00000441350 C7orf31Q8N865 590 aa23.29■■□□□ 1.32
VPS13B-204ENST00000441350 ASAP3Q8TDY4 903 aa23.29■■□□□ 1.32
VPS13B-204ENST00000441350 GRIN2DO15399 1336 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 GLRA2P23416 452 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 NMT1P30419 496 aaKnown RBP23.28■■□□□ 1.32
VPS13B-204ENST00000441350 PPP1R2P41236 205 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 NPTX2P47972 431 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 DMP1Q13316 513 aaPredicted RBP23.28■■□□□ 1.32
VPS13B-204ENST00000441350 SESTD1Q86VW0 696 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 METTL13Q8N6R0 699 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 SCFD1Q8WVM8 642 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 PRPF31Q8WWY3 499 aaKnown RBP23.28■■□□□ 1.32
VPS13B-204ENST00000441350 IFT74Q96LB3 600 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 STRA6Q9BX79 667 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 ST6GALNAC4Q9H4F1 302 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 PHF24Q9UPV7 400 aa23.28■■□□□ 1.32
VPS13B-204ENST00000441350 PPP1R37O75864 691 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 ERCC5P28715 1186 aaPredicted RBP23.27■■□□□ 1.32
VPS13B-204ENST00000441350 DNM2P50570 870 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 CLCN3P51790 818 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 NCKAP1LP55160 1127 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 STIM1Q13586 685 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 NFRKBQ6P4R8 1299 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 MYOCDQ8IZQ8 938 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 SLC17A8Q8NDX2 589 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 FAM200AQ8TCP9 573 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 PSPC1Q8WXF1 523 aaKnown RBP23.27■■□□□ 1.32
VPS13B-204ENST00000441350 SUCLA2Q9P2R7 463 aaPredicted RBP23.27■■□□□ 1.32
VPS13B-204ENST00000441350 GTF2IRD1Q9UHL9 959 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 KCNG1Q9UIX4 513 aa23.27■■□□□ 1.32
VPS13B-204ENST00000441350 TRIP12Q14669 1992 aaPredicted RBP23.26■■□□□ 1.31
VPS13B-204ENST00000441350 C17orf102A2RUQ5 167 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 DNM1LO00429 736 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 MYBP10242 640 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 GNAT1P11488 350 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 MXD4Q14582 209 aaPredicted RBP23.26■■□□□ 1.31
VPS13B-204ENST00000441350 PPP2R5AQ15172 486 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 BMT2Q1RMZ1 405 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 DHTKD1Q96HY7 919 aaPredicted RBP23.26■■□□□ 1.31
VPS13B-204ENST00000441350 MED15Q96RN5 788 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 CRISPLD2Q9H0B8 497 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 RBSNQ9H1K0 784 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 CBX8Q9HC52 389 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 KBTBD13C9JR72 458 aa23.26■■□□□ 1.31
VPS13B-204ENST00000441350 EIF3DO15371 548 aaKnown RBP eCLIP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms