RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 FCGRTP55899 365 aa17.22■□□□□ 0.35
TVP23C-203ENST00000428082 CCDC70Q6NSX1 233 aa17.22■□□□□ 0.35
TVP23C-203ENST00000428082 ARMCX2Q7L311 632 aa17.22■□□□□ 0.35
TVP23C-203ENST00000428082 NLRX1Q86UT6 975 aa17.22■□□□□ 0.35
TVP23C-203ENST00000428082 NUDT12Q9BQG2 462 aa17.22■□□□□ 0.35
TVP23C-203ENST00000428082 DIS3Q9Y2L1 958 aaKnown RBP17.22■□□□□ 0.35
TVP23C-203ENST00000428082 DOCK5Q9H7D0 1870 aa17.22■□□□□ 0.35
TVP23C-203ENST00000428082 LOC102724159A0A0B4J2E5 919 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 PSMD10O75832 226 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 LCA5LO95447 670 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 CYP2C19P33261 490 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 SPIRE1Q08AE8 756 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.35
TVP23C-203ENST00000428082 PWP2Q15269 919 aaKnown RBP17.21■□□□□ 0.35
TVP23C-203ENST00000428082 GNPTABQ3T906 1256 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 LRCH2Q5VUJ6 765 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 SEPT14Q6ZU15 432 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 ZNF467Q7Z7K2 595 aaPredicted RBP17.21■□□□□ 0.35
TVP23C-203ENST00000428082 NEK11Q8NG66 645 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 PNKPQ96T60 521 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 DEF6Q9H4E7 631 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 ST7Q9NRC1 585 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 L1RE1Q9UN81 338 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 CYP2B6P20813 491 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 KLK7P49862 253 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 RHOXF2Q9BQY4 288 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 LUC7LQ9NQ29 371 aaKnown RBP17.21■□□□□ 0.35
TVP23C-203ENST00000428082 PANK4Q9NVE7 773 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 SLC5A4Q9NY91 659 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 TRIM10Q9UDY6 481 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 VAV3Q9UKW4 847 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 JRKLQ9Y4A0 524 aa17.21■□□□□ 0.35
TVP23C-203ENST00000428082 SPATA31C2B4DYI2 1134 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 GPR25O00155 361 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 MAFGO15525 162 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 DHX15O43143 795 aaKnown RBP17.2■□□□□ 0.34
TVP23C-203ENST00000428082 GAS7O60861 476 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 ATP1A1P05023 1023 aaKnown RBP17.2■□□□□ 0.34
TVP23C-203ENST00000428082 HOXC6P09630 235 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 PRLRP16471 622 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 COASYQ13057 564 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 FAM26FQ5R3K3 315 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 HAUS3Q68CZ6 603 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 MAMDC4Q6UXC1 1216 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 LRRC55Q6ZSA7 311 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 FBXO16Q8IX29 292 aaPredicted RBP17.2■□□□□ 0.34
TVP23C-203ENST00000428082 SOCS4Q8WXH5 440 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 RUBCNQ92622 972 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 SYN2Q92777 582 aaPredicted RBP17.2■□□□□ 0.34
TVP23C-203ENST00000428082 HPS3Q969F9 1004 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 ALS2CR12Q96Q35 445 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
TVP23C-203ENST00000428082 SSU72P8A0A1W2PR75 194 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 DDX39AO00148 427 aaKnown RBP17.19■□□□□ 0.34
TVP23C-203ENST00000428082 POLR3GO15318 223 aaPredicted RBP17.19■□□□□ 0.34
TVP23C-203ENST00000428082 ICAM3P32942 547 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 RGS2P41220 211 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 NCAPH2Q6IBW4 605 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 OTOP1Q7RTM1 612 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CACNA2D4Q7Z3S7 1137 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 ERMNQ8TAM6 284 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 DNAJC19Q96DA6 116 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 RIT2Q99578 217 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 TINF2Q9BSI4 451 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 IFIH1Q9BYX4 1025 aaKnown RBP17.19■□□□□ 0.34
TVP23C-203ENST00000428082 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 ABCB6Q9NP58 842 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 FLRT1Q9NZU1 646 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 GABRQQ9UN88 632 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 AKR1B10O60218 316 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 SNAI1O95863 264 aaPredicted RBP17.19■□□□□ 0.34
TVP23C-203ENST00000428082 KCNA2P16389 499 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 SP2Q02086 613 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 KIF22Q14807 665 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CCL14Q16627 93 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CCDC40Q4G0X9 1142 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CD99L2Q8TCZ2 262 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CDHR1Q96JP9 859 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 TEKT3Q9BXF9 490 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 VIPAS39Q9H9C1 493 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.19■□□□□ 0.34
TVP23C-203ENST00000428082 PSD3Q9NYI0 1048 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.19■□□□□ 0.34
TVP23C-203ENST00000428082 FAM184BQ9ULE4 1060 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 PCDHA13Q9Y5I0 950 aa17.19■□□□□ 0.34
TVP23C-203ENST00000428082 CHMP2AO43633 222 aa17.18■□□□□ 0.34
TVP23C-203ENST00000428082 KIF11P52732 1056 aa17.18■□□□□ 0.34
TVP23C-203ENST00000428082 MARSP56192 900 aaKnown RBP17.18■□□□□ 0.34
TVP23C-203ENST00000428082 VSNL1P62760 191 aa17.18■□□□□ 0.34
TVP23C-203ENST00000428082 MAP2K1Q02750 393 aaPredicted RBP17.18■□□□□ 0.34
TVP23C-203ENST00000428082 ITIH3Q06033 890 aa17.18■□□□□ 0.34
TVP23C-203ENST00000428082 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
TVP23C-203ENST00000428082 ZCWPW2Q504Y3 356 aa17.18■□□□□ 0.34
TVP23C-203ENST00000428082 HSP90B2PQ58FF3 399 aa17.18■□□□□ 0.34
TVP23C-203ENST00000428082 KCTD17Q8N5Z5 321 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms