RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PCSK4Q6UW60 755 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 NOSTRINQ8IVI9 506 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 ZBTB38Q8NAP3 1195 aaPredicted RBP6.85□□□□□ -1.31
LINC00458-202ENST00000427299 ASB15Q8WXK1 588 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 CCDC113Q9H0I3 377 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 ZSWIM4Q9H7M6 989 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 CDK11AQ9UQ88 783 aaPredicted RBP6.85□□□□□ -1.31
LINC00458-202ENST00000427299 GIT1Q9Y2X7 761 aa6.85□□□□□ -1.31
LINC00458-202ENST00000427299 PDPK1O15530 556 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 MAKP20794 623 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 STAT5BP51692 787 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 GABREP78334 506 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 GRAMD4Q6IC98 578 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 FSTL4Q6MZW2 842 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 SGMS1Q86VZ5 419 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 TMPRSS6Q8IU80 811 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 FAM177A1Q8N128 213 aaPredicted RBP6.84□□□□□ -1.31
LINC00458-202ENST00000427299 D2HGDHQ8N465 521 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 SHCBP1Q8NEM2 672 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 PCDHA9Q9Y5H5 950 aa6.84□□□□□ -1.31
LINC00458-202ENST00000427299 ITSN2Q9NZM3 1697 aa6.84□□□□□ -1.32
LINC00458-202ENST00000427299 MAFO75444 373 aaPredicted RBP6.83□□□□□ -1.32
LINC00458-202ENST00000427299 CRTAMO95727 393 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 DNM2P50570 870 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 NFE2L2Q16236 605 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 ZNF627Q7L945 461 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 BCL6BQ8N143 479 aaPredicted RBP6.83□□□□□ -1.32
LINC00458-202ENST00000427299 WDR48Q8TAF3 677 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 TMEM176AQ96HP8 235 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 EXOC2Q96KP1 924 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 ADGBQ8N7X0 1667 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 AKNAQ7Z591 1439 aa6.83□□□□□ -1.32
LINC00458-202ENST00000427299 ADAMTS12P58397 1594 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 FAM221BA6H8Z2 402 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 RASSF10A6NK89 507 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 CAPN14A8MX76 684 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 NANOS3P60323 173 aaKnown RBP6.82□□□□□ -1.32
LINC00458-202ENST00000427299 SSRP1Q08945 709 aaKnown RBP6.82□□□□□ -1.32
LINC00458-202ENST00000427299 MTERF2Q49AM1 385 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
LINC00458-202ENST00000427299 CISD2Q8N5K1 135 aaKnown RBP6.82□□□□□ -1.32
LINC00458-202ENST00000427299 KCNH7Q9NS40 1196 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 SNTG2Q9NY99 539 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 PFDN2Q9UHV9 154 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 FAM184BQ9ULE4 1060 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 TBX22Q9Y458 520 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 NESP48681 1621 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 FGD6Q6ZV73 1430 aa6.82□□□□□ -1.32
LINC00458-202ENST00000427299 UGGT2Q9NYU1 1516 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 CYP27B1O15528 508 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 RIN1Q13671 783 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 SAFB2Q14151 953 aaKnown RBP eCLIP6.81□□□□□ -1.32
LINC00458-202ENST00000427299 BMS1Q14692 1282 aaKnown RBP6.81□□□□□ -1.32
LINC00458-202ENST00000427299 MRGPRGQ86SM5 289 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 THEMISQ8N1K5 641 aaPredicted RBP6.81□□□□□ -1.32
LINC00458-202ENST00000427299 IPO9Q96P70 1041 aaKnown RBP6.81□□□□□ -1.32
LINC00458-202ENST00000427299 DEPDC7Q96QD5 511 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 PARPBPQ9NWS1 579 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 ASB1Q9Y576 335 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 CTDP1Q9Y5B0 961 aaPredicted RBP6.81□□□□□ -1.32
LINC00458-202ENST00000427299 FHOD3Q2V2M9 1422 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 IQGAP2Q13576 1575 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 PHLDB1Q86UU1 1377 aa6.81□□□□□ -1.32
LINC00458-202ENST00000427299 GRIN2BQ13224 1484 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 TLDC2A0PJX2 215 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 HFM1A2PYH4 1435 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 SCDO00767 359 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 FOXP2O15409 715 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 DIAPH1O60610 1272 aaKnown RBP6.8□□□□□ -1.32
LINC00458-202ENST00000427299 RRP1BQ14684 758 aaKnown RBP6.8□□□□□ -1.32
LINC00458-202ENST00000427299 Q6ZPA2 131 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 CLIP3Q96DZ5 547 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 GBP4Q96PP9 640 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 AGAP2Q99490 1192 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 SH3BP1Q9Y3L3 701 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 B3GALT1Q9Y5Z6 326 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 ARHGEF11O15085 1522 aa6.8□□□□□ -1.32
LINC00458-202ENST00000427299 MYOM3Q5VTT5 1437 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 UACAQ9BZF9 1416 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 PRAMEF22A3QJZ6 481 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 PEX11BO96011 259 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 FAM153BP0C7A2 387 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 KRT4P19013 534 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 SDHAP31040 664 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 HIPK4Q8NE63 616 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 RABGGTAQ92696 567 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 DLG3Q92796 817 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
LINC00458-202ENST00000427299 DHRS4Q9BTZ2 278 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 SLC2A4RGQ9NR83 387 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 VWA7Q9Y334 891 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 MRPS23Q9Y3D9 190 aaKnown RBP6.79□□□□□ -1.32
LINC00458-202ENST00000427299 DMRT1Q9Y5R6 373 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 CROCC2H7BZ55 1655 aa6.79□□□□□ -1.32
LINC00458-202ENST00000427299 TARBP1Q13395 1621 aaKnown RBP6.79□□□□□ -1.32
LINC00458-202ENST00000427299 GOLGA6L22H0YM25 854 aa6.78□□□□□ -1.32
LINC00458-202ENST00000427299 APEX1P27695 318 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms