RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 NAALADL2Q58DX5 795 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 PTCRAQ6ISU1 281 aaPredicted RBP10.42□□□□□ -0.74
NUP50-206ENST00000422489 B3GNT9Q6UX72 402 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 FAM43BQ6ZT52 329 aaPredicted RBP10.42□□□□□ -0.74
NUP50-206ENST00000422489 ANO5Q75V66 913 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 RHPN2Q8IUC4 686 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 NSUN7Q8NE18 718 aaKnown RBP10.42□□□□□ -0.74
NUP50-206ENST00000422489 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.42□□□□□ -0.74
NUP50-206ENST00000422489 SPPL3Q8TCT6 385 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 POF1BQ8WVV4 589 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 HAS1Q92839 578 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 DYDC2Q96IM9 177 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 CEP170P1Q96L14 293 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 FDXACB1Q9BRP7 624 aaPredicted RBP10.42□□□□□ -0.74
NUP50-206ENST00000422489 PLVAPQ9BX97 442 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 AAASQ9NRG9 546 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 TYW1Q9NV66 732 aaKnown RBP10.42□□□□□ -0.74
NUP50-206ENST00000422489 TMEM161AQ9NX61 479 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 VAV3Q9UKW4 847 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 PCDHB12Q9Y5F1 795 aa10.42□□□□□ -0.74
NUP50-206ENST00000422489 TBX3O15119 743 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 MAFO75444 373 aaPredicted RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 ITGB1P05556 798 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 DNAJB1P25685 340 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 GTF2F1P35269 517 aaKnown RBP eCLIP10.41□□□□□ -0.74
NUP50-206ENST00000422489 TXKP42681 527 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 CDC42EP1Q00587 391 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 PPP2R5CQ13362 524 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 CTTNQ14247 550 aaKnown RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 CLUL1Q15846 466 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 LONRF3Q496Y0 759 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 OTUD6AQ7L8S5 288 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 RBM23Q86U06 439 aaKnown RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 KSR1Q8IVT5 923 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 CCDC83Q8IWF9 413 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 DIS3L2Q8IYB7 885 aaKnown RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 THNSL1Q8IYQ7 743 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 ABI1Q8IZP0 508 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 ZNF579Q8NAF0 562 aaKnown RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 P2RX5Q93086 422 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 PABPC5Q96DU9 382 aaKnown RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 NLRP4Q96MN2 994 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 JPH2Q9BR39 696 aaPredicted RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 KCNMB3Q9NPA1 279 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 CYP26B1Q9NR63 512 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
NUP50-206ENST00000422489 RGL1Q9NZL6 768 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 LIMCH1Q9UPQ0 1083 aa10.41□□□□□ -0.74
NUP50-206ENST00000422489 A0A0C4DFX4 3053 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 ZBTB39O15060 712 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 NCK2O43639 380 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 MMP1P03956 469 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 SRGAP2CP0DJJ0 459 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 IL9P15248 144 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 SSTR3P32745 418 aaPredicted RBP10.4□□□□□ -0.74
NUP50-206ENST00000422489 IRS1P35568 1242 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
NUP50-206ENST00000422489 CYP4A11Q02928 519 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 HYAL1Q12794 435 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 SAFBQ15424 915 aaKnown RBP eCLIP10.4□□□□□ -0.74
NUP50-206ENST00000422489 CALCRLQ16602 461 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 PUS10Q3MIT2 529 aaKnown RBP10.4□□□□□ -0.74
NUP50-206ENST00000422489 XKR9Q5GH70 373 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 CATSPER4Q7RTX7 472 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 ECHDC2Q86YB7 292 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 SLFN12Q8IYM2 578 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 SLC7A3Q8WY07 619 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 PPP2R3CQ969Q6 453 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 TMEM143Q96AN5 459 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 INO80BQ9C086 356 aaPredicted RBP10.4□□□□□ -0.74
NUP50-206ENST00000422489 TMEM117Q9H0C3 514 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 ELAC1Q9H777 363 aaKnown RBP10.4□□□□□ -0.74
NUP50-206ENST00000422489 HCSTQ9UBK5 93 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 PCDHA12Q9UN75 941 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 PTPRSQ13332 1948 aa10.4□□□□□ -0.74
NUP50-206ENST00000422489 A0A087WWV3 80 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 PER2O15055 1255 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 LINC01565O15544 149 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 HOXA2O43364 376 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 FGF18O76093 207 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 SLITRK3O94933 977 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 YWHABP31946 246 aaKnown RBP10.39□□□□□ -0.75
NUP50-206ENST00000422489 NRIP1P48552 1158 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 CAMK1Q14012 370 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 EXOC8Q8IYI6 725 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 COLGALT1Q8NBJ5 622 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 NEK9Q8TD19 979 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 HELQQ8TDG4 1101 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 PRPF31Q8WWY3 499 aaKnown RBP10.39□□□□□ -0.75
NUP50-206ENST00000422489 TNFRSF25Q93038 417 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 C8orf76Q96K31 380 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 CASD1Q96PB1 797 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 CEP89Q96ST8 783 aa10.39□□□□□ -0.75
NUP50-206ENST00000422489 EIF2AK1Q9BQI3 630 aaKnown RBP10.39□□□□□ -0.75
NUP50-206ENST00000422489 LXNQ9BS40 222 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms