RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TBKBP1A7MCY6 615 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 H3BQ06 376 aaPredicted RBP10.62□□□□□ -0.71
NUP50-205ENST00000419387 SNPHO15079 494 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 ITGB1P05556 798 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 PYGBP11216 843 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 IL9P15248 144 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 ZSCAN20P17040 1043 aaPredicted RBP10.62□□□□□ -0.71
NUP50-205ENST00000419387 EIF4BP23588 611 aaKnown RBP10.62□□□□□ -0.71
NUP50-205ENST00000419387 TBC1D8BQ0IIM8 1120 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 CAMK1Q14012 370 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 DSC3Q14574 896 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 ANKRD1Q15327 319 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 TARBP2Q15633 366 aaKnown RBP10.62□□□□□ -0.71
NUP50-205ENST00000419387 LETM2Q2VYF4 491 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 XKR3Q5GH77 459 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 FAM102BQ5T8I3 360 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 FAM178BQ8IXR5 827 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 KLHL23Q8NBE8 558 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 SPPL3Q8TCT6 385 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 C1QTNF1Q9BXJ1 281 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 NIFKQ9BYG3 293 aaKnown RBP10.62□□□□□ -0.71
NUP50-205ENST00000419387 ELAC1Q9H777 363 aaKnown RBP10.62□□□□□ -0.71
NUP50-205ENST00000419387 ATP6V0A4Q9HBG4 840 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 CLDND1Q9NY35 253 aa10.62□□□□□ -0.71
NUP50-205ENST00000419387 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 STK36Q9NRP7 1315 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 BRWD1Q9NSI6 2320 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 CCDC194A0A1B0GVG4 234 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 STBD1O95210 358 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 COL9A1P20849 921 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 DNAJB1P25685 340 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 LTBRP36941 435 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 GPC3P51654 580 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 AK2P54819 239 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 CDC42EP1Q00587 391 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 HYAL1Q12794 435 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 SPOUT1Q5T280 376 aaKnown RBP10.61□□□□□ -0.71
NUP50-205ENST00000419387 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 NEK8Q86SG6 692 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 POF1BQ8WVV4 589 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 WASF1Q92558 559 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
NUP50-205ENST00000419387 FAM20AQ96MK3 541 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 CEP89Q96ST8 783 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 IGFLR1Q9H665 355 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 EPHX3Q9H6B9 360 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 CD320Q9NPF0 282 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 TYW1Q9NV66 732 aaKnown RBP10.61□□□□□ -0.71
NUP50-205ENST00000419387 TMEM161AQ9NX61 479 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
NUP50-205ENST00000419387 FAM50BQ9Y247 325 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
NUP50-205ENST00000419387 IGKV6-21A0A0C4DH24 114 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 SLC37A4O43826 429 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 DTNBO60941 627 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 CSPG5O95196 566 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 CTDNEP1O95476 244 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
NUP50-205ENST00000419387 GCFC2P16383 781 aaKnown RBP10.6□□□□□ -0.71
NUP50-205ENST00000419387 GTF2F1P35269 517 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUP50-205ENST00000419387 DNM2P50570 870 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 PSMC5P62195 406 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 PPP2R5CQ13362 524 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 ADAM15Q13444 863 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 C8orf34Q49A92 452 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 MTERF2Q49AM1 385 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 GJD3Q8N144 294 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 PPP2R3CQ969Q6 453 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 SCLT1Q96NL6 688 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 NAP1L4Q99733 375 aaKnown RBP10.6□□□□□ -0.71
NUP50-205ENST00000419387 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
NUP50-205ENST00000419387 KCNMB3Q9NPA1 279 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 GJB4Q9NTQ9 266 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
NUP50-205ENST00000419387 ORC3Q9UBD5 711 aaPredicted RBP10.6□□□□□ -0.71
NUP50-205ENST00000419387 MYO7AQ13402 2215 aa10.6□□□□□ -0.71
NUP50-205ENST00000419387 TMEM150BA6NC51 233 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 PI4K2BG5E9Z4 385 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 EML1O00423 815 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 TBX3O15119 743 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 HOXA2O43364 376 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 MARCH6O60337 910 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 CCNT1O60563 726 aaKnown RBP10.59□□□□□ -0.71
NUP50-205ENST00000419387 DKC1O60832 514 aaKnown RBP eCLIP10.59□□□□□ -0.71
NUP50-205ENST00000419387 EIF5BO60841 1220 aaKnown RBP10.59□□□□□ -0.71
NUP50-205ENST00000419387 MAFO75444 373 aaPredicted RBP10.59□□□□□ -0.71
NUP50-205ENST00000419387 FGFR1P11362 822 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 FDPSP14324 419 aaKnown RBP10.59□□□□□ -0.71
NUP50-205ENST00000419387 FGFR4P22455 802 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 IRS1P35568 1242 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 UBE3AQ05086 875 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 DLX2Q07687 328 aaPredicted RBP10.59□□□□□ -0.71
NUP50-205ENST00000419387 DRP2Q13474 957 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 ME3Q16798 604 aa10.59□□□□□ -0.71
NUP50-205ENST00000419387 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms