RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 SUCLA2Q9P2R7 463 aaPredicted RBP17.15■□□□□ 0.34
NUP50-204ENST00000417702 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
NUP50-204ENST00000417702 COL4A6Q14031 1691 aa17.15■□□□□ 0.34
NUP50-204ENST00000417702 A0A0C4DFX4 3053 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 H3BNC9 293 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 RB1P06400 928 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 YWHABP31946 246 aaKnown RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 MCM7P33993 719 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 BMPR1AP36894 532 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 RFC5P40937 340 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 POLGP54098 1239 aaPredicted RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 NPEPPSP55786 919 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 MRPS5P82675 430 aaKnown RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 DRP2Q13474 957 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 CTTNQ14247 550 aaKnown RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 TJAP1Q5JTD0 557 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 CRIPAKQ8N1N5 446 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 NEK9Q8TD19 979 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 C11orf84Q9BUA3 381 aaPredicted RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 WRAP73Q9P2S5 460 aaPredicted RBP17.14■□□□□ 0.33
NUP50-204ENST00000417702 PRUNE2Q8WUY3 3088 aa17.14■□□□□ 0.33
NUP50-204ENST00000417702 C9IYK1 514 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 WNT7AO00755 349 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 MCM2P49736 904 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 ORC2Q13416 577 aaPredicted RBP17.13■□□□□ 0.33
NUP50-204ENST00000417702 XKR9Q5GH70 373 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 ZNF410Q86VK4 478 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 CLP1Q92989 425 aaKnown RBP17.13■□□□□ 0.33
NUP50-204ENST00000417702 MRPL38Q96DV4 380 aaKnown RBP17.13■□□□□ 0.33
NUP50-204ENST00000417702 MTMR9Q96QG7 549 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
NUP50-204ENST00000417702 ATP6V0A4Q9HBG4 840 aa17.13■□□□□ 0.33
NUP50-204ENST00000417702 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
NUP50-204ENST00000417702 A0A087WZ62 844 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 C5orf67F2Z3F1 127 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 SLITRK3O94933 977 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 TRAPPC10P48553 1259 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 DSC3Q14574 896 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 ZNF174Q15697 407 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 AAK1Q2M2I8 961 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
NUP50-204ENST00000417702 NOSTRINQ8IVI9 506 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
NUP50-204ENST00000417702 TBC1D32Q96NH3 1257 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 HSD17B14Q9BPX1 270 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 FDXACB1Q9BRP7 624 aaPredicted RBP17.12■□□□□ 0.33
NUP50-204ENST00000417702 PLVAPQ9BX97 442 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 COL25A1Q9BXS0 654 aaPredicted RBP17.12■□□□□ 0.33
NUP50-204ENST00000417702 TMEM60Q9H2L4 133 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 ELAC1Q9H777 363 aaKnown RBP17.12■□□□□ 0.33
NUP50-204ENST00000417702 TMEM161AQ9NX61 479 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 COG5Q9UP83 839 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 MRPL42Q9Y6G3 142 aaKnown RBP17.12■□□□□ 0.33
NUP50-204ENST00000417702 EYSQ5T1H1 3165 aa17.12■□□□□ 0.33
NUP50-204ENST00000417702 TTC28Q96AY4 2481 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
NUP50-204ENST00000417702 MYO7AQ13402 2215 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 GAS2O43903 313 aaKnown RBP17.11■□□□□ 0.33
NUP50-204ENST00000417702 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
NUP50-204ENST00000417702 FAM189BP81408 668 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 TIGD5Q53EQ6 642 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 TTC38Q5R3I4 469 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
NUP50-204ENST00000417702 TCP11Q8WWU5 503 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 PSPC1Q8WXF1 523 aaKnown RBP17.11■□□□□ 0.33
NUP50-204ENST00000417702 HLA-CQ95604 372 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 DHX33Q9H6R0 707 aaKnown RBP17.11■□□□□ 0.33
NUP50-204ENST00000417702 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 BRWD1Q9NSI6 2320 aa17.11■□□□□ 0.33
NUP50-204ENST00000417702 TBKBP1A7MCY6 615 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 HOXA2O43364 376 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 LYPLA2O95372 231 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 FGFR4P22455 802 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 GATMP50440 423 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 EMC2Q15006 297 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
NUP50-204ENST00000417702 TMEM143Q96AN5 459 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 LMAN2LQ9H0V9 348 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 CHST12Q9NRB3 414 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 BMP2KQ9NSY1 1161 aaPredicted RBP17.1■□□□□ 0.33
NUP50-204ENST00000417702 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
NUP50-204ENST00000417702 POTEMA6NI47 508 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 ZBTB39O15060 712 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 ASAP2O43150 1006 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 CSDE1O75534 798 aaKnown RBP17.09■□□□□ 0.33
NUP50-204ENST00000417702 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.33
NUP50-204ENST00000417702 TECP42680 631 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 NAALADL2Q58DX5 795 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms