RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 PRPF40AO75400 957 aaKnown RBP33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 SELPP16109 830 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 MRPS6P82932 125 aaKnown RBP33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 FAM102BQ5T8I3 360 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 LRRC8DQ7L1W4 858 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 GPBP1Q86WP2 473 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 NME8Q8N427 588 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 IQUBQ8NA54 791 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 OSBPL7Q9BZF2 842 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 CDHR5Q9HBB8 845 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 CDY2AQ9Y6F7 541 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 CEP290O15078 2479 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 IQCF3P0C7M6 154 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 KIZQ2M2Z5 673 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 RHPN2Q8IUC4 686 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 PRPF31Q8WWY3 499 aaKnown RBP33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 STAMQ92783 540 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 GINS2Q9Y248 185 aa33.97■■■■□ 3.03
CSNK1E-206ENST00000413574 PDE4DIPQ5VU43 2346 aa33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 RSPH10B2B2RC85 870 aa33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 RSPH10BP0C881 870 aa33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 MGAT3Q09327 533 aa33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 IER5Q5VY09 327 aa33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 MCPH1Q8NEM0 835 aa33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 BADQ92934 168 aa33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 POLR3FQ9H1D9 316 aaPredicted RBP33.96■■■■□ 3.03
CSNK1E-206ENST00000413574 MYH11P35749 1972 aa33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 GAS2O43903 313 aaKnown RBP33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 NLRP11P59045 1033 aaKnown RBP33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 CACNB1Q02641 598 aaPredicted RBP33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 MBTPS1Q14703 1052 aa33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 SV2BQ7L1I2 683 aa33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 TCP11Q8WWU5 503 aa33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 PSPC1Q8WXF1 523 aaKnown RBP33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 SERTAD1Q9UHV2 236 aa33.95■■■■□ 3.03
CSNK1E-206ENST00000413574 CAND2O75155 1236 aa33.94■■■■□ 3.02
CSNK1E-206ENST00000413574 GPR32O75388 356 aa33.94■■■■□ 3.02
CSNK1E-206ENST00000413574 ARL2P36404 184 aa33.94■■■■□ 3.02
CSNK1E-206ENST00000413574 SYKP43405 635 aa33.94■■■■□ 3.02
CSNK1E-206ENST00000413574 FAM26DQ5JW98 314 aa33.94■■■■□ 3.02
CSNK1E-206ENST00000413574 ASAP3Q8TDY4 903 aa33.94■■■■□ 3.02
CSNK1E-206ENST00000413574 GBP4Q96PP9 640 aa33.94■■■■□ 3.02
CSNK1E-206ENST00000413574 GPC3P51654 580 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 LONRF3Q496Y0 759 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 MFSD5Q6N075 450 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 CELF4Q9BZC1 486 aaKnown RBP33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 COL4A3BPQ9Y5P4 624 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 TRPV2Q9Y5S1 764 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 HIP1RO75146 1068 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 LAMTOR4Q0VGL1 99 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 GPNMBQ14956 572 aa33.93■■■■□ 3.02
CSNK1E-206ENST00000413574 MYMKA6NI61 221 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 H0YGN5 161 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 RPLP2P05387 115 aaKnown RBP33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 CSF2RAP15509 400 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 GUCY2CP25092 1073 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 MDM2Q00987 491 aaPredicted RBP33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 DAW1Q8N136 415 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 TET1Q8NFU7 2136 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 NLRP4Q96MN2 994 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 OSMRQ99650 979 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 ADAMTS10Q9H324 1103 aa33.92■■■■□ 3.02
CSNK1E-206ENST00000413574 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 SFI1A8K8P3 1242 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 M0QZ92 97 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 ACTN4O43707 911 aaKnown RBP33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 SRGAP2CP0DJJ0 459 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 GLRA2P23416 452 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 MAPK7Q13164 816 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 DYMQ7RTS9 669 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 BSNDQ8WZ55 320 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 REEP2Q9BRK0 252 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 CUEDC2Q9H467 287 aa33.91■■■■□ 3.02
CSNK1E-206ENST00000413574 NBNO60934 754 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 LIG1P18858 919 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 TMEM40Q8WWA1 233 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 NLRP7Q8WX94 980 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 KBTBD4Q9NVX7 518 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 KCND2Q9NZV8 630 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 A0A087WZ62 844 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 ZNF202O95125 648 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 KRT18P05783 430 aaKnown RBP33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 GIT2Q14161 759 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 DEFB128Q7Z7B8 93 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 GRAMD1CQ8IYS0 662 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 SCLT1Q96NL6 688 aa33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 FDXACB1Q9BRP7 624 aaPredicted RBP33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 PYM1Q9BRP8 204 aaKnown RBP33.9■■■■□ 3.02
CSNK1E-206ENST00000413574 SLFN14P0C7P3 912 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 SNW1Q13573 536 aaKnown RBP33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 CAPSQ13938 189 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 CEP57L1Q8IYX8 460 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 FMR1NBQ8N0W7 255 aaPredicted RBP33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 TMEM199Q8N511 208 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 ENGASEQ8NFI3 743 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 DDX12PQ92771 950 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 VWCEQ96DN2 955 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 TNMDQ9H2S6 317 aa33.89■■■■□ 3.02
CSNK1E-206ENST00000413574 CSDE1O75534 798 aaKnown RBP33.88■■■■□ 3.01
CSNK1E-206ENST00000413574 GHRP10912 638 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms