RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 AK9Q5TCS8 1911 aa5.15□□□□□ -1.58
SF3B1-202ENST00000409915 COL2A1P02458 1487 aaPredicted RBP5.15□□□□□ -1.58
SF3B1-202ENST00000409915 A0A0D9SFI3 127 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 H3BM21 787 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 GPAA1O43292 621 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ORC4O43929 436 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 DNAJC8O75937 253 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SNUPNO95149 360 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 GDF11O95390 407 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SETSIPP0DME0 302 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 CCND1P24385 295 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 MSNP26038 577 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 IDH3AP50213 366 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 NEK4P51957 841 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 GTF2A2P52657 109 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 RPS26P62854 115 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 JAG1P78504 1218 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 KIF23Q02241 960 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 DHX9Q08211 1270 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ADCY1Q08828 1119 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 NOGQ13253 232 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 NMIQ13287 307 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SLC9A5Q14940 896 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SEPT7Q16181 437 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 CDC37Q16543 378 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SKOR2Q2VWA4 1001 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 FAM133BQ5BKY9 247 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ZMYM1Q5SVZ6 1142 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 TTC22Q5TAA0 569 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ZSCAN25Q6NSZ9 544 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 C16orf54Q6UWD8 224 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 CENPQQ7L2Z9 268 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 RSRC2Q7L4I2 434 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 EPM2AIP1Q7L775 607 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ANKRD23Q86SG2 305 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 NPAS3Q8IXF0 933 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 TRIM22Q8IYM9 498 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 PDCL2Q8N4E4 241 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ZSCAN1Q8NBB4 408 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SLC44A5Q8NCS7 719 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 MNS1Q8NEH6 495 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ANKRD7Q92527 254 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 USP7Q93009 1102 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 OPTNQ96CV9 577 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 PGBD4Q96DM1 585 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 DYNLL2Q96FJ2 89 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 WNK4Q96J92 1243 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 HHIPL1Q96JK4 782 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 FAM210AQ96ND0 272 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SERINC2Q96SA4 455 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 INSM2Q96T92 566 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 EIF2AK1Q9BQI3 630 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 MRPL4Q9BYD3 311 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF341Q9BYN7 854 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 CRNKL1Q9BZJ0 848 aaKnown RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF395Q9H8N7 513 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 EPB41L4AQ9HCS5 686 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 DCP1AQ9NPI6 582 aaPredicted RBP5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ANLNQ9NQW6 1124 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 PCDHGB3Q9Y5G1 929 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 CSADQ9Y600 493 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 SLC4A4Q9Y6R1 1079 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 FOCADQ5VW36 1801 aa5.15□□□□□ -1.59
SF3B1-202ENST00000409915 TRBV23-1A0A0A0MS06 115 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 FAM221AA4D161 298 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 A6NCN8 305 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 PHF20L1A8MW92 1017 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 FOXN1O15353 648 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 FOXP2O15409 715 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 KPNA6O60684 536 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 NPTXRO95502 500 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 HLA-DOAP06340 250 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 ZFYP08048 801 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 MYBL2P10244 700 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 LPOP22079 712 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 LORP23490 312 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 SSR1P43307 286 aaKnown RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 PLCD1P51178 756 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 AK2P54819 239 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 GSCP56915 257 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 TBX2Q13207 712 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 TRIM14Q14142 442 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 NCAPHQ15003 741 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 CCDC92Q53HC0 331 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 SPECC1Q5M775 1068 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 VPS53Q5VIR6 699 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 VHLLQ6RSH7 139 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 LRRC69Q6ZNQ3 347 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF589Q86UQ0 364 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 FCHSD1Q86WN1 690 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 CLEC10AQ8IUN9 316 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF295-AS1Q8N0V1 137 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 CRACR2BQ8N4Y2 399 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-202ENST00000409915 ITFG2Q969R8 447 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 MIR1-1HGQ9H1L0 117 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 EPN3Q9H201 632 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 IL25Q9H293 177 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 IFT22Q9H7X7 185 aa5.14□□□□□ -1.59
SF3B1-202ENST00000409915 DZANK1Q9NVP4 752 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms