RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 WDR5P61964 334 aaKnown RBP24.9■■□□□ 1.58
PTCD3-203ENST00000409783 IKBKEQ14164 716 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 ATL3Q6DD88 541 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 KSR1Q8IVT5 923 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 LRRC15Q8TF66 581 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 PRPF31Q8WWY3 499 aaKnown RBP24.9■■□□□ 1.58
PTCD3-203ENST00000409783 APBB2Q92870 758 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 BHMT2Q9H2M3 363 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 ATP6V0A4Q9HBG4 840 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 ERVK-5Q9HDB9 667 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 DAXXQ9UER7 740 aaPredicted RBP24.9■■□□□ 1.58
PTCD3-203ENST00000409783 SLC4A7Q9Y6M7 1214 aa24.9■■□□□ 1.58
PTCD3-203ENST00000409783 TCHHQ07283 1943 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 ZBBXA8MT70 800 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 USO1O60763 962 aaKnown RBP24.89■■□□□ 1.58
PTCD3-203ENST00000409783 ARL2P36404 184 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 CDC42EP1Q00587 391 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 DNM1Q05193 864 aaKnown RBP24.89■■□□□ 1.58
PTCD3-203ENST00000409783 STK38Q15208 465 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 SPECC1Q5M775 1068 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 PADI6Q6TGC4 694 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 FAM228AQ86W67 206 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 RHPN2Q8IUC4 686 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 KCTD17Q8N5Z5 321 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 TCP11Q8WWU5 503 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 EPSTI1Q96J88 318 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 CCDC43Q96MW1 224 aaKnown RBP24.89■■□□□ 1.58
PTCD3-203ENST00000409783 CCSER1Q9C0I3 900 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 DNM3Q9UQ16 869 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 COL4A3BPQ9Y5P4 624 aa24.89■■□□□ 1.58
PTCD3-203ENST00000409783 A0A087WZ62 844 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.88■■□□□ 1.57
PTCD3-203ENST00000409783 ARHGEF35A5YM69 484 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 GRXCR1A8MXD5 290 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 SPTLC2O15270 562 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 PPP6R2O75170 966 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 DARSP14868 501 aaKnown RBP24.88■■□□□ 1.57
PTCD3-203ENST00000409783 EIF4BP23588 611 aaKnown RBP24.88■■□□□ 1.57
PTCD3-203ENST00000409783 UBA7P41226 1012 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 FXR1P51114 621 aaKnown RBP eCLIP24.88■■□□□ 1.57
PTCD3-203ENST00000409783 DEFB103AP81534 67 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 ZNF410Q86VK4 478 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 KRI1Q8N9T8 703 aaKnown RBP24.88■■□□□ 1.57
PTCD3-203ENST00000409783 PSPC1Q8WXF1 523 aaKnown RBP24.88■■□□□ 1.57
PTCD3-203ENST00000409783 CHAMP1Q96JM3 812 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 PLIN2Q99541 437 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 FDXACB1Q9BRP7 624 aaPredicted RBP24.88■■□□□ 1.57
PTCD3-203ENST00000409783 NT5C3AQ9H0P0 336 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 TMX1Q9H3N1 280 aa24.88■■□□□ 1.57
PTCD3-203ENST00000409783 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.87■■□□□ 1.57
PTCD3-203ENST00000409783 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.87■■□□□ 1.57
PTCD3-203ENST00000409783 EFCAB14O75071 495 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 RPS6KA5O75582 802 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 CYP11B2P19099 503 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 LAMTOR4Q0VGL1 99 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 ZRSR1Q15695 479 aaKnown RBP24.87■■□□□ 1.57
PTCD3-203ENST00000409783 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.87■■□□□ 1.57
PTCD3-203ENST00000409783 RTN4RL1Q86UN2 441 aaPredicted RBP24.87■■□□□ 1.57
PTCD3-203ENST00000409783 ASAP3Q8TDY4 903 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 LINC01599Q8WXQ3 324 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 LRCH3Q96II8 777 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 IFT122Q9HBG6 1241 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 GPRC5CQ9NQ84 441 aa24.87■■□□□ 1.57
PTCD3-203ENST00000409783 SMAD3P84022 425 aaKnown RBP24.86■■□□□ 1.57
PTCD3-203ENST00000409783 PAK2Q13177 524 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 KARSQ15046 597 aaKnown RBP24.86■■□□□ 1.57
PTCD3-203ENST00000409783 MCPH1Q8NEM0 835 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 PHOSPHO2Q8TCD6 241 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 NLRP7Q8WX94 980 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 SYMPKQ92797 1274 aaKnown RBP24.86■■□□□ 1.57
PTCD3-203ENST00000409783 SLC9A7Q96T83 725 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 BLOC1S4Q9NUP1 217 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 RCOR1Q9UKL0 485 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 ST3GAL5Q9UNP4 418 aa24.86■■□□□ 1.57
PTCD3-203ENST00000409783 TTC3P53804 2025 aa24.85■■□□□ 1.57
PTCD3-203ENST00000409783 ASAP2O43150 1006 aa24.85■■□□□ 1.57
PTCD3-203ENST00000409783 CSDE1O75534 798 aaKnown RBP24.85■■□□□ 1.57
PTCD3-203ENST00000409783 ATP2A2P16615 1042 aaKnown RBP24.85■■□□□ 1.57
PTCD3-203ENST00000409783 GLRA2P23416 452 aa24.85■■□□□ 1.57
PTCD3-203ENST00000409783 AXDND1Q5T1B0 1012 aaPredicted RBP24.85■■□□□ 1.57
PTCD3-203ENST00000409783 CALML4Q96GE6 196 aa24.85■■□□□ 1.57
PTCD3-203ENST00000409783 CDK5RAP3Q96JB5 506 aa24.85■■□□□ 1.57
PTCD3-203ENST00000409783 NLRP4Q96MN2 994 aa24.85■■□□□ 1.57
PTCD3-203ENST00000409783 POLR3FQ9H1D9 316 aaPredicted RBP24.85■■□□□ 1.57
PTCD3-203ENST00000409783 ENPP3O14638 875 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 PLCG1P19174 1290 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 KCNJ6P48051 423 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 SLC12A3P55017 1021 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 NFX1Q12986 1120 aaKnown RBP24.84■■□□□ 1.57
PTCD3-203ENST00000409783 MXD4Q14582 209 aaPredicted RBP24.84■■□□□ 1.57
PTCD3-203ENST00000409783 RINT1Q6NUQ1 792 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 MAEAQ7L5Y9 396 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 SYT2Q8N9I0 419 aaPredicted RBP24.84■■□□□ 1.57
PTCD3-203ENST00000409783 SCLT1Q96NL6 688 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 RUSC1Q9BVN2 902 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 GCOM2Q9BZD3 368 aaPredicted RBP24.84■■□□□ 1.57
PTCD3-203ENST00000409783 CFAP45Q9UL16 551 aa24.84■■□□□ 1.57
PTCD3-203ENST00000409783 GPR182O15218 404 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 MGEA5O60502 916 aa24.83■■□□□ 1.57
PTCD3-203ENST00000409783 SRGAP2CP0DJJ0 459 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms