RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 STK33Q9BYT3 514 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 VPS33BQ9H267 617 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 GDF3Q9NR23 364 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 KCNH7Q9NS40 1196 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 PKD2L1Q9P0L9 805 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 DNAJC12Q9UKB3 198 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 LOXHD1Q8IVV2 1947 aa18.35■□□□□ 0.53
NUP50-203ENST00000407019 NFIBO00712 420 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 EVI5O60447 810 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 HEXIM1O94992 359 aaKnown RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 P4HBP07237 508 aaKnown RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 TNNC1P63316 161 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 MYL7Q01449 175 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 NNTQ13423 1086 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 MYBPC2Q14324 1141 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 CBWD6Q4V339 395 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 CBWD3Q5JTY5 395 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 CBWD5Q5RIA9 395 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 DNAAF5Q86Y56 855 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 MCF2L2Q86YR7 1114 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 DAW1Q8N136 415 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 TPCN2Q8NHX9 752 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 U2AF1L4Q8WU68 220 aaKnown RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 LMBR1Q8WVP7 490 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 CLEC4DQ8WXI8 215 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 ZBED3Q96IU2 234 aaPredicted RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 KRT12Q99456 494 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 INTS2Q9H0H0 1204 aaKnown RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 DAAM1Q9Y4D1 1078 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 K7ENM7 598 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 WDR46O15213 610 aaKnown RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 EXOC3O60645 756 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 GLI1P08151 1106 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 TRIM49P0CI25 452 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 TRIM49CP0CI26 452 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 DRAP1Q14919 205 aaPredicted RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 FMNL3Q8IVF7 1028 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
NUP50-203ENST00000407019 IL31RAQ8NI17 732 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 CAMKK2Q96RR4 588 aa18.34■□□□□ 0.53
NUP50-203ENST00000407019 LMNB1P20700 586 aa18.33■□□□□ 0.52
NUP50-203ENST00000407019 BFSP1Q12934 665 aa18.33■□□□□ 0.52
NUP50-203ENST00000407019 PAK2Q13177 524 aa18.33■□□□□ 0.52
NUP50-203ENST00000407019 LNX1Q8TBB1 728 aaPredicted RBP18.33■□□□□ 0.52
NUP50-203ENST00000407019 GOLPH3Q9H4A6 298 aa18.33■□□□□ 0.52
NUP50-203ENST00000407019 EPB41L5Q9HCM4 733 aa18.33■□□□□ 0.52
NUP50-203ENST00000407019 DPEP1P16444 411 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 RNASE9P60153 205 aaKnown RBP18.32■□□□□ 0.52
NUP50-203ENST00000407019 GHRHRQ02643 423 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 GUCY2DQ02846 1103 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 ALCAMQ13740 583 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 PLS1Q14651 629 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 SYCE1Q8N0S2 351 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 SLC30A5Q8TAD4 765 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 AGO4Q9HCK5 861 aaKnown RBP18.32■□□□□ 0.52
NUP50-203ENST00000407019 LARSQ9P2J5 1176 aaKnown RBP18.32■□□□□ 0.52
NUP50-203ENST00000407019 APEX2Q9UBZ4 518 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 TMEM59LQ9UK28 342 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 DBR1Q9UK59 544 aaKnown RBP18.32■□□□□ 0.52
NUP50-203ENST00000407019 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 WNT10BO00744 389 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
NUP50-203ENST00000407019 CCDC172P0C7W6 258 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 MAPTP10636 758 aaKnown RBP18.32■□□□□ 0.52
NUP50-203ENST00000407019 NPEPPSP55786 919 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 NBPF9Q3BBW0 867 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 ALS2CLQ60I27 953 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 PCNX4Q63HM2 1172 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 SLFN11Q7Z7L1 901 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 TSEN2Q8NCE0 465 aaKnown RBP18.32■□□□□ 0.52
NUP50-203ENST00000407019 ACTRT1Q8TDG2 376 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 LPAR1Q92633 364 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 TMEM206Q9H813 350 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 ZHX2Q9Y6X8 837 aa18.32■□□□□ 0.52
NUP50-203ENST00000407019 CEP104O60308 925 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 OPA1O60313 960 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 HSF2BPO75031 334 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 RPS6KA5O75582 802 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 ALAS1P13196 640 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 KRT13P13646 458 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 KCNA3P22001 575 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 CARSP49589 748 aaKnown RBP18.31■□□□□ 0.52
NUP50-203ENST00000407019 GALCP54803 685 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 ITGB3BPQ13352 177 aaPredicted RBP18.31■□□□□ 0.52
NUP50-203ENST00000407019 MAEAQ7L5Y9 396 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 PEX26Q7Z412 305 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 CPXCR1Q8N123 301 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 OLIG1Q8TAK6 271 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 GPR88Q9GZN0 384 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 CWC15Q9P013 229 aaKnown RBP18.31■□□□□ 0.52
NUP50-203ENST00000407019 SAMM50Q9Y512 469 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 NCANO14594 1321 aa18.31■□□□□ 0.52
NUP50-203ENST00000407019 PHF20L1A8MW92 1017 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 TMCO5BA8MYB1 307 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 GOLGA8KD6RF30 607 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 RFX1P22670 979 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 CXCL9Q07325 125 aa18.3■□□□□ 0.52
NUP50-203ENST00000407019 AEBP2Q6ZN18 517 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms