RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PHACTR2O75167 634 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 RIT2Q99578 217 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 KCND2Q9NZV8 630 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 GRIN2DO15399 1336 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 CCNE2O96020 404 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 LRRC31Q6UY01 552 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 NT5DC3Q86UY8 548 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 MYCT1Q8N699 235 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 HES6Q96HZ4 224 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 ESYT3A0FGR9 886 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 GAS7O60861 476 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 ATP9AO75110 1047 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 ENOX2Q16206 610 aaKnown RBP16.81■□□□□ 0.28
CPSF7-202ENST00000394888 TKFCQ3LXA3 575 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 FAM186BQ8IYM0 893 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 NEUROG2Q9H2A3 272 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 SLC38A10Q9HBR0 1119 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 METTL14Q9HCE5 456 aaKnown RBP16.81■□□□□ 0.28
CPSF7-202ENST00000394888 OSGEPQ9NPF4 335 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 USP20Q9Y2K6 914 aa16.81■□□□□ 0.28
CPSF7-202ENST00000394888 A0A0A6YYK5 440 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-202ENST00000394888 DDX3YO15523 660 aaKnown RBP16.8■□□□□ 0.28
CPSF7-202ENST00000394888 KIF4AO95239 1232 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 SETQ01105 290 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-202ENST00000394888 PPP3CAQ08209 521 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 GBP6Q6ZN66 633 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 FAM160B2Q86V87 743 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 IQCKQ8N0W5 287 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 TTLL6Q8N841 843 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 CAGE1Q8TC20 777 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 SEL1LQ9UBV2 794 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 RARRES1P49788 294 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 ALKBH5Q6P6C2 394 aaKnown RBP16.8■□□□□ 0.28
CPSF7-202ENST00000394888 REPS2Q8NFH8 660 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 ARHGEF26Q96DR7 871 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 LRRC4CQ9HCJ2 640 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 BCS1LQ9Y276 419 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
CPSF7-202ENST00000394888 NR2E1Q9Y466 385 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 PFASO15067 1338 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 RAD51CO43502 376 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 EPC2Q52LR7 807 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 NIPA1Q7RTP0 329 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 METTL13Q8N6R0 699 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 AGBL3Q8NEM8 1001 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 SYTL5Q8TDW5 730 aaPredicted RBP16.8■□□□□ 0.28
CPSF7-202ENST00000394888 LCMT1Q9UIC8 334 aa16.8■□□□□ 0.28
CPSF7-202ENST00000394888 SOX5P35711 763 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
CPSF7-202ENST00000394888 MATR3P43243 847 aaKnown RBP eCLIP16.79■□□□□ 0.28
CPSF7-202ENST00000394888 ERVK-9P63128 1117 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 KIF22Q14807 665 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 PCNX4Q63HM2 1172 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 ARHGEF19Q8IW93 802 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 CHURC1Q8WUH1 139 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 TBCAO75347 108 aaKnown RBP16.79■□□□□ 0.28
CPSF7-202ENST00000394888 GFPT2O94808 682 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 LYPLA2O95372 231 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 EPB41P11171 864 aaKnown RBP16.79■□□□□ 0.28
CPSF7-202ENST00000394888 ADSSP30520 456 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 ZNF76P36508 570 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 C10orf76Q5T2E6 689 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 RTKN2Q8IZC4 609 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 ACTRT1Q8TDG2 376 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
CPSF7-202ENST00000394888 RGS20O76081 388 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 SEC14L1Q92503 715 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 SH2D3AQ9BRG2 576 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 INTS2Q9H0H0 1204 aaKnown RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 POLR2AP24928 1970 aaKnown RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 ZNF233A6NK53 670 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 ANXA13P27216 316 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 GLE1Q53GS7 698 aaKnown RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 POTEAQ6S8J7 498 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 C12orf56Q8IXR9 622 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 MREGQ8N565 214 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 ARL8AQ96BM9 186 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 STK33Q9BYT3 514 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 PLEKHA4Q9H4M7 779 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 ZNRF3Q9ULT6 936 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 RIPK3Q9Y572 518 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 BZW2Q9Y6E2 419 aaKnown RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 GALCP54803 685 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 ZNF280AP59817 542 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 BFSP1Q12934 665 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 DRAP1Q14919 205 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 PTPROQ16827 1216 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-202ENST00000394888 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 RNF14Q9UBS8 474 aa16.78■□□□□ 0.28
CPSF7-202ENST00000394888 H0YGN5 161 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 ITGA4P13612 1032 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 PGM5Q15124 567 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms