RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 GREB1Q4ZG55 1949 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 VNN1O95497 513 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 NR3C1P04150 777 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 ASNSP08243 561 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 FAM153BP0C7A2 387 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 DSG3P32926 999 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 PRKG1Q13976 671 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 NFIL3Q16649 462 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 EDRF1Q3B7T1 1238 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 FAM153CQ494X1 144 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 NOL9Q5SY16 702 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 CBWD2Q8IUF1 395 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 FAM133AQ8N9E0 248 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 PRPF38AQ8NAV1 312 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 FBXL18Q96ME1 805 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 FAM153AQ9UHL3 310 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 HSDL1Q3SXM5 330 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 ARHGAP29Q52LW3 1261 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 SLFN11Q7Z7L1 901 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 MS4A4AQ96JQ5 239 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 PSMB7Q99436 277 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 MINDY3Q9H8M7 445 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 FEM1BQ9UK73 627 aa9.31□□□□□ -0.92
GAPVD1-204ENST00000394083 FNDC1Q4ZHG4 1894 aaPredicted RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 RRP9O43818 475 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 GUCY2CP25092 1073 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 GTF2BQ00403 316 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 TRIM50Q86XT4 487 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 HELQQ8TDG4 1101 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 CCDC12Q8WUD4 166 aaPredicted RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 ALG3Q92685 438 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.925e-7■■■■■ 59
GAPVD1-204ENST00000394083 CCPG1Q9ULG6 757 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 HYOU1Q9Y4L1 999 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 PCDHGC5Q9Y5F6 944 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 F8VZ95 297 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 CLDN10P78369 228 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 FKBP3Q00688 224 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 PPATQ06203 517 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 SIX1Q15475 284 aaPredicted RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 LBX2Q6XYB7 198 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 CCDC112Q8NEF3 446 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 ZNF577Q9BSK1 485 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 ADAM33Q9BZ11 813 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 PORCNQ9H237 461 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 PCDHA13Q9Y5I0 950 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 LOC400499M0QZD8 3231 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 TRAF5O00463 557 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 PSMA7O14818 248 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 GLI1P08151 1106 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 RRAGAQ7L523 313 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 APOBEC3GQ9HC16 384 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 PDGFCQ9NRA1 345 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 GOLGA6L6A8MZA4 724 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 LYPLA2O95372 231 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 ADAM9Q13443 819 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 COPS5Q92905 334 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 ADAMTS1Q9UHI8 967 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 CNTNAP2Q9UHC6 1331 aa9.3□□□□□ -0.92
GAPVD1-204ENST00000394083 SCN10AQ9Y5Y9 1956 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 ITGA4P13612 1032 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 TCF4P15884 667 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 BAG6P46379 1132 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 TRERF1Q96PN7 1200 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 NTPCRQ9BSD7 190 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 SYT17Q9BSW7 474 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 NAGPAQ9UK23 515 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 THSD7BQ9C0I4 1608 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 ALAS1P13196 640 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 POLR2FP61218 127 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 ADCY2Q08462 1091 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 PSMD2Q13200 908 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 ZNF568Q3ZCX4 644 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 SEZ6Q53EL9 994 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 TRMT1LQ7Z2T5 733 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 GUCA1BQ9UMX6 200 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 PTPRSQ13332 1948 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 FOXN3O00409 490 aaPredicted RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 URI1O94763 535 aaPredicted RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 CDK11BP21127 795 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 ASAP3Q8TDY4 903 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 TUFT1Q9NNX1 390 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 RBM12Q9NTZ6 932 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 RMND1Q9NWS8 449 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 HDAC9Q9UKV0 1011 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 RABGAP1Q9Y3P9 1069 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 SPATA31C2B4DYI2 1134 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 PRKCIP41743 596 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 C2orf54Q08AI8 447 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 HAUS3Q68CZ6 603 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 CYP26C1Q6V0L0 522 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 CNGA4Q8IV77 575 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 ZNF280CQ8ND82 737 aa9.29□□□□□ -0.92
GAPVD1-204ENST00000394083 TMEM117Q9H0C3 514 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms