RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 GPR88Q9GZN0 384 aa22.14■■□□□ 1.13
CLN5-201ENST00000377453 THAP2Q9H0W7 228 aa22.14■■□□□ 1.13
CLN5-201ENST00000377453 TDRD3Q9H7E2 651 aaKnown RBP22.14■■□□□ 1.13
CLN5-201ENST00000377453 NOVA2Q9UNW9 492 aaKnown RBP22.14■■□□□ 1.13
CLN5-201ENST00000377453 TMEM110-MUSTN1A8MSY1 372 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 ONECUT3O60422 494 aaPredicted RBP22.13■■□□□ 1.13
CLN5-201ENST00000377453 ADRA2BP18089 450 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 RPL13P26373 211 aaKnown RBP22.13■■□□□ 1.13
CLN5-201ENST00000377453 LLGL1Q15334 1064 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 ABCB5Q2M3G0 1257 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 KCNV1Q6PIU1 500 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 SLFN11Q7Z7L1 901 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 SLC20A1Q8WUM9 679 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 CPP00450 1065 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 SOX5P35711 763 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 STAT1P42224 750 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 DHX9Q08211 1270 aaKnown RBP22.13■■□□□ 1.13
CLN5-201ENST00000377453 IFT88Q13099 833 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 QPCTQ16769 361 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 C10orf76Q5T2E6 689 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 ELMO3Q96BJ8 720 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 COG5Q9UP83 839 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 LY75O60449 1722 aa22.13■■□□□ 1.13
CLN5-201ENST00000377453 IGLV3-22A0A075B6J6 115 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 GOLGA6L10A6NI86 522 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 HMGB1P1B2RPK0 211 aaPredicted RBP22.12■■□□□ 1.13
CLN5-201ENST00000377453 FMO5P49326 533 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 ZYXQ15942 572 aaKnown RBP22.12■■□□□ 1.13
CLN5-201ENST00000377453 BMT2Q1RMZ1 405 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 ODF2Q5BJF6 829 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 ZNF746Q6NUN9 644 aaPredicted RBP22.12■■□□□ 1.13
CLN5-201ENST00000377453 CPNE8Q86YQ8 564 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 ZSWIM2Q8NEG5 633 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 PCIF1Q9H4Z3 704 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 PI4KBQ9UBF8 816 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 ATP8A1Q9Y2Q0 1164 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 IFI16Q16666 785 aaKnown RBP22.12■■□□□ 1.13
CLN5-201ENST00000377453 SPRED3Q2MJR0 410 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 C1orf186Q6ZWK4 172 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 VPS36Q86VN1 386 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 OTUD6BQ8N6M0 293 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 SLC30A5Q8TAD4 765 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 HES6Q96HZ4 224 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 GLT8D2Q9H1C3 349 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 METTL14Q9HCE5 456 aaKnown RBP22.12■■□□□ 1.13
CLN5-201ENST00000377453 SUCLA2Q9P2R7 463 aaPredicted RBP22.12■■□□□ 1.13
CLN5-201ENST00000377453 AMFRQ9UKV5 643 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 PRR12Q9ULL5 1215 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 LTBP1Q14766 1721 aa22.12■■□□□ 1.13
CLN5-201ENST00000377453 BMP3P12645 472 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 MARCKSL1P49006 195 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 DLG4P78352 724 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 LRCH2Q5VUJ6 765 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 MOXD1Q6UVY6 613 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 UHMK1Q8TAS1 419 aaKnown RBP22.11■■□□□ 1.13
CLN5-201ENST00000377453 MDM1Q8TC05 714 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 HOOK2Q96ED9 719 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 FAM20AQ96MK3 541 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 EFCC1Q9HA90 598 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 ACP6Q9NPH0 428 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 SUGT1Q9Y2Z0 365 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 SIPA1L1O43166 1804 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 GREB1LQ9C091 1923 aaPredicted RBP22.11■■□□□ 1.13
CLN5-201ENST00000377453 SMIM23A6NLE4 172 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 DDX3YO15523 660 aaKnown RBP22.11■■□□□ 1.13
CLN5-201ENST00000377453 PSMC2P35998 433 aaKnown RBP22.11■■□□□ 1.13
CLN5-201ENST00000377453 CUL1Q13616 776 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 ICE2Q659A1 982 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 TMC3Q7Z5M5 1100 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 ALG3Q92685 438 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 ZNF622Q969S3 477 aaKnown RBP eCLIP22.11■■□□□ 1.13
CLN5-201ENST00000377453 FIZ1Q96SL8 496 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 HSD17B14Q9BPX1 270 aa22.11■■□□□ 1.13
CLN5-201ENST00000377453 SLC16A3O15427 465 aaKnown RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 MAGOHP61326 146 aaKnown RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 OTOP1Q7RTM1 612 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 RASGEF1CQ8N431 466 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 ACER1Q8TDN7 264 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 ATP8B4Q8TF62 1192 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 MAGOHBQ96A72 148 aaKnown RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 ZDHHC15Q96MV8 337 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 INTS2Q9H0H0 1204 aaKnown RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 ATAD5Q96QE3 1844 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 TBX3O15119 743 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 SHBGP04278 402 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 FERP16591 822 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 MSL1Q68DK7 614 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 PHLDB3Q6NSJ2 640 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 KLRG2A4D1S0 409 aaPredicted RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 FOXN3O00409 490 aaPredicted RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 CES2O00748 559 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 MEFVO15553 781 aaPredicted RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 ATMINO43313 823 aaPredicted RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 KIAA0754O94854 1291 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 HNRNPH1P31943 449 aaKnown RBP22.1■■□□□ 1.13
CLN5-201ENST00000377453 KRT71Q3SY84 523 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 GOPCQ9HD26 462 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 AGPAT3Q9NRZ7 376 aa22.1■■□□□ 1.13
CLN5-201ENST00000377453 ARP10275 920 aa22.09■■□□□ 1.13
CLN5-201ENST00000377453 ODR4Q5SWX8 454 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms