RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PPP2R5EQ16537 467 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 CDO1Q16878 200 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 SGO2Q562F6 1265 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 C9orf131Q5VYM1 1079 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 PALM2Q8IXS6 379 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 SCYL3Q8IZE3 742 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 EPC1Q9H2F5 836 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 ADAM22Q9P0K1 906 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 HDAC6Q9UBN7 1215 aa19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 HOXA7P31268 230 aaPredicted RBP19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 AGO2Q9UKV8 859 aaKnown RBP19.37■□□□□ 0.69
PTPDC1-202ENST00000375360 DYNC1LI2O43237 492 aaPredicted RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 ITIH3Q06033 890 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 C11orf70Q9BRQ4 267 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 KCNF1Q9H3M0 494 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 PACSIN2Q9UNF0 486 aaPredicted RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 PDXKO00764 312 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 TNPO2O14787 897 aaKnown RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 PHKA2P46019 1235 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 TGFB2P61812 414 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 CYP2W1Q8TAV3 490 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 MRPL47Q9HD33 250 aaKnown RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 NGRNQ9NPE2 291 aaKnown RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 RBAKQ9NYW8 714 aaPredicted RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 CNOT8Q9UFF9 292 aaKnown RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 TMX2Q9Y320 296 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 SALL1Q9NSC2 1324 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 A0A1B0GTH6 734 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 NFIBO00712 420 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 CYTH3O43739 400 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 ATP5DP30049 168 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 ABCD1P33897 745 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 MRPS9P82933 396 aaKnown RBP19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 PPP2R5CQ13362 524 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 MTMR3Q13615 1198 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 KRT39Q6A163 491 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
PTPDC1-202ENST00000375360 NCK2O43639 380 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 XKR3Q5GH77 459 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ERICH1Q86X53 443 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ANKRD13AQ8IZ07 590 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 LRRC4Q9HBW1 653 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ANAPC7Q9UJX3 599 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ARP10275 920 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 RFX6Q8HWS3 928 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 MICALL1Q8N3F8 863 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 SEPT1Q8WYJ6 367 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 INTS2Q9H0H0 1204 aaKnown RBP19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 A6NJR5 290 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ATF2P15336 505 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 RPUSD2Q8IZ73 545 aaKnown RBP19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 TRIM7Q9C029 511 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 LIMA1Q9UHB6 759 aaKnown RBP19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 RSPH10B2B2RC85 870 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 SGK1O00141 431 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 RSPH10BP0C881 870 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ZNF18P17022 549 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 CYP2B6P20813 491 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 FXR2P51116 673 aaKnown RBP eCLIP19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 HUNKP57058 714 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ZNF699Q32M78 642 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 MAP7D3Q8IWC1 876 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 ATP8A1Q9Y2Q0 1164 aa19.35■□□□□ 0.69
PTPDC1-202ENST00000375360 DISP2A7MBM2 1401 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 RIC1Q4ADV7 1423 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 NDC80O14777 642 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 FGGP02679 453 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 TM4SF1P30408 202 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 RHBDL3P58872 404 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 DGAT1O75907 488 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 ZNF157P51786 506 aaPredicted RBP19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 SURF1Q15526 300 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 FAM163AQ96GL9 167 aaPredicted RBP19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 KIFC3Q9BVG8 833 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 CCL15-CCL14A0A0B4J2E2 113 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 MED24O75448 989 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 KRT1P04264 644 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 BACE1P56817 501 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 CCDC6Q16204 474 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 CCL15Q16663 113 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 HAUS1Q96CS2 278 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 TRIM11Q96F44 468 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 KIAA1586Q9HCI6 787 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 DNAJC17Q9NVM6 304 aaKnown RBP19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 MAD1L1Q9Y6D9 718 aa19.34■□□□□ 0.69
PTPDC1-202ENST00000375360 STAMBPO95630 424 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 CD44P16070 742 aaKnown RBP19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 ADCY1Q08828 1119 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 GRB10Q13322 594 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 SNAPC2Q13487 334 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 TTC19Q6DKK2 380 aaPredicted RBP19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 CYP4F22Q6NT55 531 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 CDR2LQ86X02 465 aaPredicted RBP19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 NSMCE1Q8WV22 266 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 WDR24Q96S15 920 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 HEMGNQ9BXL5 484 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 EHD4Q9H223 541 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 PASKQ96RG2 1323 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 ASB14A6NK59 587 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms