RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TBC1D10BQ4KMP7 808 aaPredicted RBP20.45■□□□□ 0.86
USP49-202ENST00000373010 MSL3Q8N5Y2 521 aaKnown RBP20.45■□□□□ 0.86
USP49-202ENST00000373010 TSKSQ9UJT2 592 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 PPP1R9AQ9ULJ8 1098 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 TISP43B9A030 160 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 MEI1Q5TIA1 1274 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 ALKBH5Q6P6C2 394 aaKnown RBP20.45■□□□□ 0.86
USP49-202ENST00000373010 WNK4Q96J92 1243 aa20.45■□□□□ 0.86
USP49-202ENST00000373010 RPAP3Q9H6T3 665 aaPredicted RBP20.45■□□□□ 0.86
USP49-202ENST00000373010 RBM12Q9NTZ6 932 aaKnown RBP20.45■□□□□ 0.86
USP49-202ENST00000373010 EXOC3O60645 756 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 RARRES1P49788 294 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 PGM5Q15124 567 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 UGCGQ16739 394 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 NBPF12Q5TAG4 269 aaPredicted RBP20.44■□□□□ 0.86
USP49-202ENST00000373010 CCDC70Q6NSX1 233 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 MICALL2Q8IY33 904 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 CTDP1Q9Y5B0 961 aaPredicted RBP20.44■□□□□ 0.86
USP49-202ENST00000373010 TGFB2P61812 414 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 FAM193AP78312 1265 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 CCDC102AQ96A19 550 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 PCIF1Q9H4Z3 704 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.44■□□□□ 0.86
USP49-202ENST00000373010 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
USP49-202ENST00000373010 HACL1Q9UJ83 578 aa20.44■□□□□ 0.86
USP49-202ENST00000373010 ATP9AO75110 1047 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 QARSP47897 775 aaKnown RBP20.43■□□□□ 0.86
USP49-202ENST00000373010 GMPSP49915 693 aaPredicted RBP20.43■□□□□ 0.86
USP49-202ENST00000373010 C10orf76Q5T2E6 689 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 NSMFQ6X4W1 530 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 TRERF1Q96PN7 1200 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 GOLPH3Q9H4A6 298 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 DNAJC12Q9UKB3 198 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 ERICH4A6NGS2 130 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 DDX3XO00571 662 aaKnown RBP eCLIP20.43■□□□□ 0.86
USP49-202ENST00000373010 CYP2C19P33261 490 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 STAT1P42224 750 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 CFAP221Q4G0U5 840 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 VPS18Q9P253 973 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 DBR1Q9UK59 544 aaKnown RBP20.43■□□□□ 0.86
USP49-202ENST00000373010 NENFQ9UMX5 172 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
USP49-202ENST00000373010 BTNL10A8MVZ5 291 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 NOP2P46087 812 aaKnown RBP20.42■□□□□ 0.86
USP49-202ENST00000373010 PTPROQ16827 1216 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 ATG4CQ96DT6 458 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 INTS2Q9H0H0 1204 aaKnown RBP20.42■□□□□ 0.86
USP49-202ENST00000373010 LARSQ9P2J5 1176 aaKnown RBP20.42■□□□□ 0.86
USP49-202ENST00000373010 HPCAL4Q9UM19 191 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 BCS1LQ9Y276 419 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 F8VZ95 297 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 EVI5O60447 810 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 ZBED4O75132 1171 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 FERP16591 822 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 RNASE9P60153 205 aaKnown RBP20.42■□□□□ 0.86
USP49-202ENST00000373010 MYL7Q01449 175 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 DRAP1Q14919 205 aaPredicted RBP20.42■□□□□ 0.86
USP49-202ENST00000373010 RNF207Q6ZRF8 634 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 GOLGA5Q8TBA6 731 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 U2AF1L4Q8WU68 220 aaKnown RBP20.42■□□□□ 0.86
USP49-202ENST00000373010 SELENOOQ9BVL4 669 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 FZD1Q9UP38 647 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 FAN1Q9Y2M0 1017 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 RIPK3Q9Y572 518 aa20.42■□□□□ 0.86
USP49-202ENST00000373010 YWHABP31946 246 aaKnown RBP20.41■□□□□ 0.86
USP49-202ENST00000373010 SOX5P35711 763 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 DLG4P78352 724 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 BFSP1Q12934 665 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 PPP2R5AQ15172 486 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 PRAMEF18Q5VWM3 479 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 SLC9A9Q8IVB4 645 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 PDCD2LQ9BRP1 358 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 GPRC5CQ9NQ84 441 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 PXMP2Q9NR77 195 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 TBC1D22BQ9NU19 505 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 ADAM21Q9UKJ8 722 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 VWA5AO00534 786 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 BACH1O14867 736 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 PHACTR2O75167 634 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 CCNE2O96020 404 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 VPS36Q86VN1 386 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 ZSWIM2Q8NEG5 633 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 OLIG1Q8TAK6 271 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 LNX1Q8TBB1 728 aaPredicted RBP20.41■□□□□ 0.86
USP49-202ENST00000373010 STK33Q9BYT3 514 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 VIPAS39Q9H9C1 493 aa20.41■□□□□ 0.86
USP49-202ENST00000373010 CNOT7Q9UIV1 285 aaKnown RBP20.41■□□□□ 0.86
USP49-202ENST00000373010 FAM170AA1A519 330 aa20.4■□□□□ 0.86
USP49-202ENST00000373010 TESPA1A2RU30 521 aaPredicted RBP20.4■□□□□ 0.86
USP49-202ENST00000373010 PLS3P13797 630 aa20.4■□□□□ 0.86
USP49-202ENST00000373010 RPS12P25398 132 aaKnown RBP20.4■□□□□ 0.86
USP49-202ENST00000373010 ARHGEF16Q5VV41 709 aa20.4■□□□□ 0.86
USP49-202ENST00000373010 PLA2G4FQ68DD2 849 aa20.4■□□□□ 0.86
USP49-202ENST00000373010 AENQ8WTP8 325 aaKnown RBP20.4■□□□□ 0.86
USP49-202ENST00000373010 ZKSCAN4Q969J2 545 aaPredicted RBP20.4■□□□□ 0.86
USP49-202ENST00000373010 CCDC43Q96MW1 224 aaKnown RBP20.4■□□□□ 0.86
USP49-202ENST00000373010 CBWD1Q9BRT8 395 aa20.4■□□□□ 0.86
USP49-202ENST00000373010 GPR88Q9GZN0 384 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms