RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 WASF1Q92558 559 aa19.16■□□□□ 0.66
BRCC3-202ENST00000340647 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
BRCC3-202ENST00000340647 DDX11L8A8MPP1 907 aa19.15■□□□□ 0.66
BRCC3-202ENST00000340647 DARSP14868 501 aaKnown RBP19.15■□□□□ 0.66
BRCC3-202ENST00000340647 PLA2G5P39877 138 aa19.15■□□□□ 0.66
BRCC3-202ENST00000340647 TCEAL5Q5H9L2 206 aa19.15■□□□□ 0.66
BRCC3-202ENST00000340647 KSR1Q8IVT5 923 aa19.15■□□□□ 0.66
BRCC3-202ENST00000340647 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
BRCC3-202ENST00000340647 UBE2ZQ9H832 354 aaPredicted RBP19.15■□□□□ 0.66
BRCC3-202ENST00000340647 ALG13Q9NP73 1137 aaKnown RBP19.15■□□□□ 0.66
BRCC3-202ENST00000340647 PLAGL2Q9UPG8 496 aa19.15■□□□□ 0.66
BRCC3-202ENST00000340647 ITGB1P05556 798 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 FGFR1P11362 822 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 ATF7P17544 494 aaPredicted RBP19.14■□□□□ 0.65
BRCC3-202ENST00000340647 QARSP47897 775 aaKnown RBP19.14■□□□□ 0.65
BRCC3-202ENST00000340647 GUCY1B3Q02153 619 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 EPHA7Q15375 998 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 LRRC55Q6ZSA7 311 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.14■□□□□ 0.65
BRCC3-202ENST00000340647 SPPL3Q8TCT6 385 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 DYDC2Q96IM9 177 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 MTMR9Q96QG7 549 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 MAP7D2Q96T17 732 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 TMEM60Q9H2L4 133 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 CYP26B1Q9NR63 512 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 C1orf112Q9NSG2 853 aa19.14■□□□□ 0.65
BRCC3-202ENST00000340647 SLITRK3O94933 977 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 P4HBP07237 508 aaKnown RBP19.13■□□□□ 0.65
BRCC3-202ENST00000340647 STAG3L1P0CL83 205 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 IBSPP21815 317 aaPredicted RBP19.13■□□□□ 0.65
BRCC3-202ENST00000340647 TMOD1P28289 359 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 LTBRP36941 435 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 RBM25P49756 843 aaKnown RBP19.13■□□□□ 0.65
BRCC3-202ENST00000340647 FAM43BQ6ZT52 329 aaPredicted RBP19.13■□□□□ 0.65
BRCC3-202ENST00000340647 ZNF598Q86UK7 904 aaKnown RBP19.13■□□□□ 0.65
BRCC3-202ENST00000340647 C4orf19Q8IY42 314 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 P2RX5Q93086 422 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 PLVAPQ9BX97 442 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 DHX33Q9H6R0 707 aaKnown RBP19.13■□□□□ 0.65
BRCC3-202ENST00000340647 CWH43Q9H720 699 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 PCDHB7Q9Y5E2 793 aa19.13■□□□□ 0.65
BRCC3-202ENST00000340647 A0A087WZ62 844 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 DENND3A2RUS2 1198 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
BRCC3-202ENST00000340647 IRS1P35568 1242 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 CTTNQ14247 550 aaKnown RBP19.12■□□□□ 0.65
BRCC3-202ENST00000340647 PTPROQ16827 1216 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 AAK1Q2M2I8 961 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 CTC1Q2NKJ3 1217 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 KLHL23Q8NBE8 558 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 NEK9Q8TD19 979 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 CASD1Q96PB1 797 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 HSD17B14Q9BPX1 270 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 FDXACB1Q9BRP7 624 aaPredicted RBP19.12■□□□□ 0.65
BRCC3-202ENST00000340647 LXNQ9BS40 222 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 C11orf84Q9BUA3 381 aaPredicted RBP19.12■□□□□ 0.65
BRCC3-202ENST00000340647 NSUN3Q9H649 340 aaKnown RBP19.12■□□□□ 0.65
BRCC3-202ENST00000340647 EPHX3Q9H6B9 360 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 ELAC1Q9H777 363 aaKnown RBP19.12■□□□□ 0.65
BRCC3-202ENST00000340647 IFT122Q9HBG6 1241 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 CD320Q9NPF0 282 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 TMEM161AQ9NX61 479 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 RWDD3Q9Y3V2 267 aa19.12■□□□□ 0.65
BRCC3-202ENST00000340647 EIF5BO60841 1220 aaKnown RBP19.11■□□□□ 0.65
BRCC3-202ENST00000340647 CYP4A11Q02928 519 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 DLX2Q07687 328 aaPredicted RBP19.11■□□□□ 0.65
BRCC3-202ENST00000340647 HYAL1Q12794 435 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 TIGD5Q53EQ6 642 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 CLLU1OSQ5K130 101 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 ODR4Q5SWX8 454 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 NCAPH2Q6IBW4 605 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 ECHDC2Q86YB7 292 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 NAP1L4Q99733 375 aaKnown RBP19.11■□□□□ 0.65
BRCC3-202ENST00000340647 C1QTNF1Q9BXJ1 281 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 LMAN2LQ9H0V9 348 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 TYW1Q9NV66 732 aaKnown RBP19.11■□□□□ 0.65
BRCC3-202ENST00000340647 SUCLA2Q9P2R7 463 aaPredicted RBP19.11■□□□□ 0.65
BRCC3-202ENST00000340647 LRFN2Q9ULH4 789 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 PCDHGC5Q9Y5F6 944 aa19.11■□□□□ 0.65
BRCC3-202ENST00000340647 TBKBP1A7MCY6 615 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 CD2BP2O95400 341 aaKnown RBP19.1■□□□□ 0.65
BRCC3-202ENST00000340647 KCNA5P22460 613 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 LEXMQ3ZCV2 418 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 ADGRD2Q7Z7M1 963 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 RHPN2Q8IUC4 686 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 SLFN12Q8IYM2 578 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 ZNF710Q8N1W2 664 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 EIF2AK1Q9BQI3 630 aaKnown RBP19.1■□□□□ 0.65
BRCC3-202ENST00000340647 LLPHQ9BRT6 129 aaKnown RBP19.1■□□□□ 0.65
BRCC3-202ENST00000340647 MINDY3Q9H8M7 445 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 XPNPEP1Q9NQW7 623 aa19.1■□□□□ 0.65
BRCC3-202ENST00000340647 A0A087WWV3 80 aa19.09■□□□□ 0.65
BRCC3-202ENST00000340647 A0A0U1RQF3 1178 aa19.09■□□□□ 0.65
BRCC3-202ENST00000340647 YWHABP31946 246 aaKnown RBP19.09■□□□□ 0.65
BRCC3-202ENST00000340647 FBXO18Q8NFZ0 1043 aa19.09■□□□□ 0.65
BRCC3-202ENST00000340647 NLRP7Q8WX94 980 aa19.09■□□□□ 0.65
BRCC3-202ENST00000340647 KHSRPQ92945 711 aaKnown RBP eCLIP19.09■□□□□ 0.652e-6■■□□□ 14.2
BRCC3-202ENST00000340647 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
BRCC3-202ENST00000340647 PABPC5Q96DU9 382 aaKnown RBP19.09■□□□□ 0.65
BRCC3-202ENST00000340647 FAM122AQ96E09 287 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms