RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 TIFAQ96CG3 184 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 CDK5RAP3Q96JB5 506 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 PBX4Q9BYU1 374 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 DDX19AQ9NUU7 478 aaKnown RBP20.84■□□□□ 0.93
CIRBP-201ENST00000320936 KIAA1024Q9UPX6 916 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 NOC2LQ9Y3T9 749 aaKnown RBP20.84■□□□□ 0.93
CIRBP-201ENST00000320936 DGAT1O75907 488 aa20.83■□□□□ 0.93
CIRBP-201ENST00000320936 ZSCAN22P10073 491 aaPredicted RBP20.83■□□□□ 0.93
CIRBP-201ENST00000320936 PDIA4P13667 645 aaKnown RBP20.83■□□□□ 0.93
CIRBP-201ENST00000320936 CDC42EP1Q00587 391 aa20.83■□□□□ 0.93
CIRBP-201ENST00000320936 RASSF8Q8NHQ8 419 aa20.83■□□□□ 0.93
CIRBP-201ENST00000320936 DBR1Q9UK59 544 aaKnown RBP20.83■□□□□ 0.93
CIRBP-201ENST00000320936 COL4A3BPQ9Y5P4 624 aa20.83■□□□□ 0.93
CIRBP-201ENST00000320936 GPR182O15218 404 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 TLL1O43897 1013 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 UPP2O95045 317 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 XRCC6P12956 609 aaKnown RBP eCLIP20.82■□□□□ 0.92
CIRBP-201ENST00000320936 MUTP22033 750 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 FOXD4L6Q3SYB3 417 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-201ENST00000320936 FOXD4L3Q6VB84 417 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-201ENST00000320936 Q7L0L9 218 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 KSR1Q8IVT5 923 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 DEFB123Q8N688 67 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 FAM161BQ96MY7 647 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 FTHL17Q9BXU8 183 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 GCOM2Q9BZD3 368 aaPredicted RBP20.82■□□□□ 0.92
CIRBP-201ENST00000320936 ADAMTS10Q9H324 1103 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 ST3GAL5Q9UNP4 418 aa20.82■□□□□ 0.92
CIRBP-201ENST00000320936 A0A087WZ62 844 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 DENND3A2RUS2 1198 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 SRGAP2CP0DJJ0 459 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 MYOGP15173 224 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 EIF4BP23588 611 aaKnown RBP20.81■□□□□ 0.92
CIRBP-201ENST00000320936 MARCKSP29966 332 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-201ENST00000320936 ECM1Q16610 540 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 GPR153Q6NV75 609 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 MAEAQ7L5Y9 396 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 FAM228AQ86W67 206 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 PRPF31Q8WWY3 499 aaKnown RBP20.81■□□□□ 0.92
CIRBP-201ENST00000320936 ZNF396Q96N95 335 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-201ENST00000320936 FDXACB1Q9BRP7 624 aaPredicted RBP20.81■□□□□ 0.92
CIRBP-201ENST00000320936 NKX2-4Q9H2Z4 354 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 ERVK-5Q9HDB9 667 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 PCDHA11Q9Y5I1 949 aa20.81■□□□□ 0.92
CIRBP-201ENST00000320936 F13A1P00488 732 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 DARSP14868 501 aaKnown RBP20.8■□□□□ 0.92
CIRBP-201ENST00000320936 UBA7P41226 1012 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 LAMTOR4Q0VGL1 99 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 PADI6Q6TGC4 694 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 CABP7Q86V35 215 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 ZNF410Q86VK4 478 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 AK8Q96MA6 479 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 USP28Q96RU2 1077 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 PLIN2Q99541 437 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 POLR3FQ9H1D9 316 aaPredicted RBP20.8■□□□□ 0.92
CIRBP-201ENST00000320936 BHMT2Q9H2M3 363 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 SLC28A3Q9HAS3 691 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 DNM3Q9UQ16 869 aa20.8■□□□□ 0.92
CIRBP-201ENST00000320936 YBX2Q9Y2T7 364 aaKnown RBP20.8■□□□□ 0.92
CIRBP-201ENST00000320936 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-201ENST00000320936 CSDE1O75534 798 aaKnown RBP20.79■□□□□ 0.92
CIRBP-201ENST00000320936 FGFR4P22455 802 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 SFPQP23246 707 aaKnown RBP eCLIP20.79■□□□□ 0.92
CIRBP-201ENST00000320936 LONP1P36776 959 aaKnown RBP20.79■□□□□ 0.92
CIRBP-201ENST00000320936 PKP1Q13835 747 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 STK38Q15208 465 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 FAM102BQ5T8I3 360 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 PPP2R2DQ66LE6 453 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 MCPH1Q8NEM0 835 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 CALML4Q96GE6 196 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 XPNPEP1Q9NQW7 623 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
CIRBP-201ENST00000320936 CHD9Q3L8U1 2897 aa20.79■□□□□ 0.92
CIRBP-201ENST00000320936 GJB5O95377 273 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 SSBP05455 408 aaKnown RBP eCLIP20.78■□□□□ 0.92
CIRBP-201ENST00000320936 CA3P07451 260 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 TFDP1Q14186 410 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 MXD4Q14582 209 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-201ENST00000320936 PTPAQ15257 358 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 RNF149Q8NC42 400 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 LINC01599Q8WXQ3 324 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 MMTAG2Q9BU76 263 aaKnown RBP20.78■□□□□ 0.92
CIRBP-201ENST00000320936 NT5C3AQ9H0P0 336 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 TMX1Q9H3N1 280 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 E9PMD0 336 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 ENPP3O14638 875 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 ASAP2O43150 1006 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 PHKA2P46019 1235 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 GRIN1Q05586 938 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 YME1L1Q96TA2 773 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 ADAM2Q99965 735 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 INO80BQ9C086 356 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-201ENST00000320936 TSPYL2Q9H2G4 693 aaPredicted RBP20.78■□□□□ 0.92
CIRBP-201ENST00000320936 GPRC5CQ9NQ84 441 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 TFIP11Q9UBB9 837 aaKnown RBP20.78■□□□□ 0.92
CIRBP-201ENST00000320936 LRFN2Q9ULH4 789 aa20.78■□□□□ 0.92
CIRBP-201ENST00000320936 TMEM265A0A087WTH1 108 aa20.77■□□□□ 0.91
CIRBP-201ENST00000320936 EYA4O95677 639 aa20.77■□□□□ 0.91
CIRBP-201ENST00000320936 ZSCAN20P17040 1043 aaPredicted RBP20.77■□□□□ 0.91
CIRBP-201ENST00000320936 CATSPER4Q7RTX7 472 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms