RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 GUCY1A3Q02108 690 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 BEND6Q5SZJ8 279 aaPredicted RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 DARS2Q6PI48 645 aaKnown RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 FAM149B1Q96BN6 582 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 IPO5O00410 1097 aaKnown RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 KCTD2Q14681 263 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 LINC00116Q8NCU8 138 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 NUP85Q9BW27 656 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 DIS3Q9Y2L1 958 aaKnown RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 ZSCAN20P17040 1043 aaPredicted RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 BAG6P46379 1132 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 CCDC93Q567U6 631 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 ZNF564Q8TBZ8 553 aaPredicted RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 C11orf70Q9BRQ4 267 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 ACTR5Q9H9F9 607 aaPredicted RBP18.51■□□□□ 0.55
GABRB3-202ENST00000311550 L2HGDHQ9H9P8 463 aa18.51■□□□□ 0.55
GABRB3-202ENST00000311550 PDE1BQ01064 536 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 PMS2P54278 862 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 TBC1D16Q8TBP0 767 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 EMSYQ7Z589 1322 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 DENND3A2RUS2 1198 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 ERVK-24P63145 666 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 SLC18A3Q16572 532 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 ZNF449Q6P9G9 518 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 ATP6V1G3Q96LB4 118 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 SAYSD1Q9NPB0 183 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.5■□□□□ 0.55
GABRB3-202ENST00000311550 MEGF6O75095 1541 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 NCAPHQ15003 741 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 PHLDB3Q6NSJ2 640 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 AFAP1L2Q8N4X5 818 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 EDEM3Q9BZQ6 932 aa18.5■□□□□ 0.55
GABRB3-202ENST00000311550 MAGED2Q9UNF1 606 aaPredicted RBP18.5■□□□□ 0.55
GABRB3-202ENST00000311550 PLS3P13797 630 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 OR6B2Q6IFH4 312 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 FRMD5Q7Z6J6 570 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 TMEM131LA2VDJ0 1609 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 M0QZ92 97 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 MT-ND3P03897 115 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 PDHBP11177 359 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 SOX5P35711 763 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 FAM47EQ6ZV65 393 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 RBM12Q9NTZ6 932 aaKnown RBP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 TMEM270Q6UE05 265 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 CCNI2Q6ZMN8 369 aaPredicted RBP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 THNSL1Q8IYQ7 743 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 SCYL1Q96KG9 808 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 AGXT2Q9BYV1 514 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 AGLP35573 1532 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 PDS5AQ29RF7 1337 aaKnown RBP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 PPP2R2AP63151 447 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 SULF1Q8IWU6 871 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 NLRP4Q96MN2 994 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 REEP2Q9BRK0 252 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 TTC7AQ9ULT0 858 aaPredicted RBP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 ZRANB2O95218 330 aaKnown RBP eCLIP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 PLEKP08567 350 aaPredicted RBP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 NTRK3Q16288 839 aa18.49■□□□□ 0.55
GABRB3-202ENST00000311550 GABPB2Q8TAK5 448 aaPredicted RBP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 RNF25Q96BH1 459 aaPredicted RBP18.49■□□□□ 0.55
GABRB3-202ENST00000311550 GMNNO75496 209 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 GUCY2CP25092 1073 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 GCKP35557 465 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 ILDR1Q86SU0 546 aaPredicted RBP18.48■□□□□ 0.55
GABRB3-202ENST00000311550 RFFLQ8WZ73 363 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 GINM1Q9NU53 330 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 GMNCA6NCL1 334 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 PSMD14O00487 310 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
GABRB3-202ENST00000311550 SART1O43290 800 aaKnown RBP18.48■□□□□ 0.55
GABRB3-202ENST00000311550 CPP00450 1065 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 FAM47CQ5HY64 1035 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 NLRP14Q86W24 1093 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 ERICH1Q86X53 443 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 WDR64B1ANS9 1081 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 PDXKO00764 312 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 GIPC1O14908 333 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 QARSP47897 775 aaKnown RBP18.48■□□□□ 0.55
GABRB3-202ENST00000311550 JAK3P52333 1124 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 CDO1Q16878 200 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 HP1BP3Q5SSJ5 553 aaPredicted RBP18.48■□□□□ 0.55
GABRB3-202ENST00000311550 C16orf86Q6ZW13 317 aa18.48■□□□□ 0.55
GABRB3-202ENST00000311550 SRRM1Q8IYB3 904 aaKnown RBP18.48■□□□□ 0.55
GABRB3-202ENST00000311550 MYCBPQ99417 103 aaPredicted RBP18.48■□□□□ 0.55
GABRB3-202ENST00000311550 EYA4O95677 639 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 P4HBP07237 508 aaKnown RBP18.47■□□□□ 0.55
GABRB3-202ENST00000311550 SLC9A1P19634 815 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 ELOA2Q8IYF1 753 aaPredicted RBP18.47■□□□□ 0.55
GABRB3-202ENST00000311550 PYROXD1Q8WU10 500 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 CDKL2Q92772 493 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 PNKPQ96T60 521 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 MYOM1P52179 1685 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 SSTR3P32745 418 aaPredicted RBP18.47■□□□□ 0.55
GABRB3-202ENST00000311550 PEX19P40855 299 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 CCNYQ8ND76 341 aa18.47■□□□□ 0.55
GABRB3-202ENST00000311550 RNPC3Q96LT9 517 aaKnown RBP18.47■□□□□ 0.55
GABRB3-202ENST00000311550 MAD2L2Q9UI95 211 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms