RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
PCF11-201ENST00000298281 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
PCF11-201ENST00000298281 VPS39Q96JC1 886 aa12.87□□□□□ -0.35
PCF11-201ENST00000298281 GTSE1Q9NYZ3 720 aa12.87□□□□□ -0.35
PCF11-201ENST00000298281 KDM1AO60341 852 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 ATP10AO60312 1499 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 OSTNP61366 133 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 ZNF658Q5TYW1 1059 aaPredicted RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 ADCK1Q86TW2 530 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 ZNF507Q8TCN5 953 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 YY1AP1Q9H869 796 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 PARVBQ9HBI1 364 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 MYL3P08590 195 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 STAT2P52630 851 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 ZKSCAN8Q15776 578 aaPredicted RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 SCN4BQ8IWT1 228 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 CAPN10Q9HC96 672 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 CNOT7Q9UIV1 285 aaKnown RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 MT-ND3P03897 115 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 SLFN12LQ6IEE8 588 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 PRPSAP2O60256 369 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 PAPOLAP51003 745 aaKnown RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 SCNN1DP51172 638 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 SERPINB13Q9UIV8 391 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 TAF1BQ53T94 588 aaPredicted RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 MFN1Q8IWA4 741 aa12.86□□□□□ -0.35
PCF11-201ENST00000298281 C17orf53Q8N3J3 647 aaPredicted RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 MRPS26Q9BYN8 205 aaKnown RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 UTP6Q9NYH9 597 aaKnown RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 NXF1Q9UBU9 619 aaKnown RBP12.86□□□□□ -0.35
PCF11-201ENST00000298281 PYGBP11216 843 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 CYP4F22Q6NT55 531 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 CEP170P1Q96L14 293 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 PAIP2BQ9ULR5 123 aaKnown RBP12.85□□□□□ -0.35
PCF11-201ENST00000298281 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 MOCS3O95396 460 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 MAP4P27816 1152 aaKnown RBP12.85□□□□□ -0.35
PCF11-201ENST00000298281 HDAC4P56524 1084 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 SH3BP5LQ7L8J4 393 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 MYOM2P54296 1465 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 PPP3CCP48454 512 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 SLC16A1P53985 500 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 FAM160B2Q86V87 743 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
PCF11-201ENST00000298281 KLHL18O94889 574 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 ALFQ53S48 1182 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 CMTR1Q8N1G2 835 aaKnown RBP12.85□□□□□ -0.35
PCF11-201ENST00000298281 C10orf53Q8N6V4 93 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 GTF2A1LQ9UNN4 478 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 BMP3P12645 472 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 KRT39Q6A163 491 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 GOLGA8HP0CJ92 632 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 ZMYM1Q5SVZ6 1142 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 PDIK1LQ8N165 341 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
PCF11-201ENST00000298281 PYGMP11217 842 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 SPDYAQ5MJ70 313 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 C11orf96Q7Z7L8 435 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 HEXIM2Q96MH2 286 aaKnown RBP12.84□□□□□ -0.35
PCF11-201ENST00000298281 NDEL1Q9GZM8 345 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 KRT1P04264 644 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 LRRC63Q05C16 580 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 GALNT8Q9NY28 637 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 FOSL2P15408 326 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 CASP14P31944 242 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 ARMC6Q6NXE6 501 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 MAP4K1Q92918 833 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 HES6Q96HZ4 224 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 FAM96AQ9H5X1 160 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 ARHGAP26Q9UNA1 814 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 VGLL3A8MV65 326 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
PCF11-201ENST00000298281 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
PCF11-201ENST00000298281 SERPING1P05155 500 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 PSAPP07602 524 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 MXI1P50539 228 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 GTF2H3Q13889 308 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 ALS2CLQ60I27 953 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 APOA5Q6Q788 366 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 AIPL1Q9NZN9 384 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 GCNT4Q9P109 453 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
PCF11-201ENST00000298281 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 PTH1RQ03431 593 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 TCP11X2Q5H9J9 407 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
PCF11-201ENST00000298281 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
PCF11-201ENST00000298281 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms