RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 WBP1LQ9NX94 342 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 SCOCQ9UIL1 159 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 SLFN14P0C7P3 912 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 NEDD4P46934 1319 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 HADHQ16836 314 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 HIBCHQ6NVY1 386 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 PDLIM2Q96JY6 352 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 NUDT12Q9BQG2 462 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 CCPG1Q9ULG6 757 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 MYL1P05976 194 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 HOXA7P31268 230 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 STAT3P40763 770 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 ZBED6P86452 979 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 ZBTB17Q13105 803 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 MCF2L2Q86YR7 1114 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 TRIM42Q8IWZ5 723 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 MRPL11Q9Y3B7 192 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 FRMD3A2A2Y4 597 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 LAD1O00515 517 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 ADAM9Q13443 819 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 E2F4Q16254 413 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 CTU1Q7Z7A3 348 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 HAUS1Q96CS2 278 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 TEX13BQ9BXU2 312 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 PCDHA12Q9UN75 941 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 COL4A3BPQ9Y5P4 624 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 WDR19Q8NEZ3 1342 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 PPFIA2O75334 1257 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 CRHR2Q13324 411 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 EXOC3L4Q17RC7 722 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 CATSPERGQ6ZRH7 1159 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 SOCS4Q8WXH5 440 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 N4BP2L2Q92802 583 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 MKL1Q969V6 931 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 GMCL1Q96IK5 515 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 PBKQ96KB5 322 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 MROH8Q9H579 483 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 CYP2C8P10632 490 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 ALAS1P13196 640 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 CNGA1P29973 690 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 LBX1P52954 281 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 NLRP7Q8WX94 980 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 PANK4Q9NVE7 773 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 ZMYND10O75800 440 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 FCER1AP12319 257 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 TECP42680 631 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 ZKSCAN8Q15776 578 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 MFSD14CQ5VZR4 134 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 KCTD1Q719H9 257 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 RNF26Q9BY78 433 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 SLC39A2Q9NP94 309 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 TTC36A6NLP5 189 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 DSG3P32926 999 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 CYP2J2P51589 502 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 TAF11Q15544 211 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
SYNGAP1-201ENST00000293748 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 NDUFA10O95299 355 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 SERPINB6P35237 376 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 RGS2P41220 211 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 PPP2R5DQ14738 602 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 NECTIN1Q15223 517 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 P2RX5Q93086 422 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 RNF34Q969K3 372 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 P2RX7Q99572 595 aaKnown RBP12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 AKAP11Q9UKA4 1901 aa12.77□□□□□ -0.36
SYNGAP1-201ENST00000293748 KLRF2D3W0D1 207 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 DNAJC8O75937 253 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 LIFRP42702 1097 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 PDE6CP51160 858 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 DGKZQ13574 1117 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 ADAT2Q7Z6V5 191 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 CLEC10AQ8IUN9 316 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 AK8Q96MA6 479 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 ADD3Q9UEY8 706 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 ZNF148Q9UQR1 794 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 FAM155AB1AL88 458 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 TNNI1P19237 187 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 BFSP1Q12934 665 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 NAA35Q5VZE5 725 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 SNRNP48Q6IEG0 339 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 MAEAQ7L5Y9 396 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 FBXO11Q86XK2 927 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.37
SYNGAP1-201ENST00000293748 GOLGA8QA0A0J9YX86 632 aa12.76□□□□□ -0.37
SYNGAP1-201ENST00000293748 GOLGA8OA6NCC3 632 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms