RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 DBR1Q9UK59 544 aaKnown RBP15.65■□□□□ 0.1
DDX39A-201ENST00000242776 VPS13AQ96RL7 3174 aa15.64■□□□□ 0.1
DDX39A-201ENST00000242776 DMDP11532 3685 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 COL1A2P08123 1366 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 IGKV6D-21A0A0A0MT36 114 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 C2orf71A6NGG8 1288 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 C22orf31O95567 290 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 CXCL14O95715 111 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 CALM1P0DP23 149 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 CALM2P0DP24 149 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 CALM3P0DP25 149 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 ZSCAN20P17040 1043 aaPredicted RBP15.64■□□□□ 0.09
DDX39A-201ENST00000242776 NLRP11P59045 1033 aaKnown RBP15.64■□□□□ 0.09
DDX39A-201ENST00000242776 CLLU1OSQ5K130 101 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 ASTLQ6HA08 431 aaPredicted RBP15.64■□□□□ 0.09
DDX39A-201ENST00000242776 ECHDC2Q86YB7 292 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 FANCBQ8NB91 859 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 MAP4K1Q92918 833 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 TMEM87BQ96K49 555 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 SCLT1Q96NL6 688 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 ELAC1Q9H777 363 aaKnown RBP15.64■□□□□ 0.09
DDX39A-201ENST00000242776 RIC8AQ9NPQ8 531 aa15.64■□□□□ 0.09
DDX39A-201ENST00000242776 CNTNAP5Q8WYK1 1306 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 SMCO2A6NFE2 343 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 PROB1E7EW31 1015 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 MEIS1O00470 390 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 EPCAMP16422 314 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 PPM1AP35813 382 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 JAKMIP3Q5VZ66 844 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 ADSSL1Q8N142 457 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 TMTC2Q8N394 836 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 MRPL43Q8N983 215 aaKnown RBP15.63■□□□□ 0.09
DDX39A-201ENST00000242776 NKD2Q969F2 451 aaPredicted RBP15.63■□□□□ 0.09
DDX39A-201ENST00000242776 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
DDX39A-201ENST00000242776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.62■□□□□ 0.09
DDX39A-201ENST00000242776 FAM86B1E9PN63 330 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 HOXA2O43364 376 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 CSDE1O75534 798 aaKnown RBP15.62■□□□□ 0.09
DDX39A-201ENST00000242776 FAM86B2P0C5J1 330 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 NBL1P41271 181 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 MTHFRP42898 656 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 ITIH3Q06033 890 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 EFCAB12Q6NXP0 572 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 TMC5Q6UXY8 1006 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 SLC39A11Q8N1S5 342 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 NECTIN4Q96NY8 510 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 GABBR1Q9UBS5 961 aa15.62■□□□□ 0.09
DDX39A-201ENST00000242776 V9GY48 417 aaPredicted RBP15.62■□□□□ 0.09
DDX39A-201ENST00000242776 PI15O43692 258 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 NUBP1P53384 320 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 BCAR1P56945 870 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 RNF20Q5VTR2 975 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 VPS52Q8N1B4 723 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 TCEANC2Q96MN5 208 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 ZNF577Q9BSK1 485 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 SAMM50Q9Y512 469 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 C2orf16Q68DN1 1984 aa15.61■□□□□ 0.09
DDX39A-201ENST00000242776 IPO5O00410 1097 aaKnown RBP15.6■□□□□ 0.09
DDX39A-201ENST00000242776 SLC27A2O14975 620 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 ADAMTS3O15072 1205 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 DHX15O43143 795 aaKnown RBP15.6■□□□□ 0.09
DDX39A-201ENST00000242776 ZC3H11AO75152 810 aaKnown RBP eCLIP15.6■□□□□ 0.09
DDX39A-201ENST00000242776 FOSP01100 380 aaPredicted RBP15.6■□□□□ 0.09
DDX39A-201ENST00000242776 SREBF1P36956 1147 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 ID4P47928 161 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 FOXK2Q01167 660 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 ATAT1Q5SQI0 421 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 SYNE3Q6ZMZ3 975 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 TMEM173Q86WV6 379 aaPredicted RBP15.6■□□□□ 0.09
DDX39A-201ENST00000242776 BBXQ8WY36 941 aaPredicted RBP15.6■□□□□ 0.09
DDX39A-201ENST00000242776 TMEM169Q96HH4 297 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 MAP7D2Q96T17 732 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 ADAMTS10Q9H324 1103 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 DENND4AQ7Z401 1863 aa15.6■□□□□ 0.09
DDX39A-201ENST00000242776 STK25O00506 426 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 SEC24BO95487 1268 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 SSBP05455 408 aaKnown RBP eCLIP15.59■□□□□ 0.09
DDX39A-201ENST00000242776 MYBP10242 640 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 LIFRP42702 1097 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 ALDH7A1P49419 539 aaKnown RBP15.59■□□□□ 0.09
DDX39A-201ENST00000242776 CWF19L1Q69YN2 538 aaKnown RBP15.59■□□□□ 0.09
DDX39A-201ENST00000242776 MCTP2Q6DN12 878 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 LPPQ93052 612 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 GBP3Q9H0R5 595 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 FBXL21Q9UKT6 434 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
DDX39A-201ENST00000242776 INPP5FQ9Y2H2 1132 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 PSAPP07602 524 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 BMS1Q14692 1282 aaKnown RBP15.59■□□□□ 0.09
DDX39A-201ENST00000242776 RTN1Q16799 776 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 KIAA1841Q6NSI8 718 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 CABP7Q86V35 215 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 ZDHHC14Q8IZN3 488 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 KCNG4Q8TDN1 519 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 NLRP7Q8WX94 980 aa15.59■□□□□ 0.09
DDX39A-201ENST00000242776 MAFBQ9Y5Q3 323 aaPredicted RBP15.59■□□□□ 0.09
DDX39A-201ENST00000242776 DCHS1Q96JQ0 3298 aa15.58■□□□□ 0.08
DDX39A-201ENST00000242776 IGLV3-22A0A075B6J6 115 aa15.58■□□□□ 0.08
DDX39A-201ENST00000242776 EOMESO95936 686 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms