RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MTERF2Q49AM1 385 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 MAMDC4Q6UXC1 1216 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 TMEM139Q8IV31 216 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 DHX37Q8IY37 1157 aaKnown RBP19.94■□□□□ 0.78
VIM-201ENST00000224237 CPLX3Q8WVH0 158 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 IQCDQ96DY2 449 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 GPR20Q99678 358 aa19.94■□□□□ 0.78
VIM-201ENST00000224237 NIFKQ9BYG3 293 aaKnown RBP19.94■□□□□ 0.78
VIM-201ENST00000224237 TMEM88BA6NKF7 163 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 ARHGAP6O43182 974 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 EPB41P11171 864 aaKnown RBP19.93■□□□□ 0.78
VIM-201ENST00000224237 FXR1P51114 621 aaKnown RBP eCLIP19.93■□□□□ 0.78
VIM-201ENST00000224237 HSDL1Q3SXM5 330 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 PAXIP1Q6ZW49 1069 aaPredicted RBP19.93■□□□□ 0.78
VIM-201ENST00000224237 HAUS6Q7Z4H7 955 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 KSR1Q8IVT5 923 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 SYCP3Q8IZU3 236 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 FAM167AQ96KS9 214 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 NAA15Q9BXJ9 866 aaKnown RBP19.93■□□□□ 0.78
VIM-201ENST00000224237 METTL14Q9HCE5 456 aaKnown RBP19.93■□□□□ 0.78
VIM-201ENST00000224237 NRBP2Q9NSY0 501 aa19.93■□□□□ 0.78
VIM-201ENST00000224237 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.93■□□□□ 0.78
VIM-201ENST00000224237 SLC15A5A6NIM6 579 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 CLIC2O15247 247 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 TRIM21P19474 475 aaKnown RBP19.92■□□□□ 0.78
VIM-201ENST00000224237 POLGP54098 1239 aaPredicted RBP19.92■□□□□ 0.78
VIM-201ENST00000224237 PPP2R3AQ06190 1150 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 SPIRE2Q8WWL2 714 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 COPS5Q92905 334 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 HVCN1Q96D96 273 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 MAML3Q96JK9 1138 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 SPATA33Q96N06 139 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 ACCSQ96QU6 501 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 XPNPEP1Q9NQW7 623 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 AGPAT3Q9NRZ7 376 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 KCND1Q9NSA2 647 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 SLC5A4Q9NY91 659 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 CGNQ9P2M7 1197 aaKnown RBP19.92■□□□□ 0.78
VIM-201ENST00000224237 ARMCX3Q9UH62 379 aaPredicted RBP19.92■□□□□ 0.78
VIM-201ENST00000224237 KCNG1Q9UIX4 513 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 DOCK3Q8IZD9 2030 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 EMSYQ7Z589 1322 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 LGR5O75473 907 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 AKAP3O75969 853 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 EMC2Q15006 297 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 FIGNQ5HY92 759 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 CYP4F22Q6NT55 531 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 CCDC102AQ96A19 550 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 PCMTD1Q96MG8 357 aaPredicted RBP19.92■□□□□ 0.78
VIM-201ENST00000224237 NTPCRQ9BSD7 190 aaKnown RBP19.92■□□□□ 0.78
VIM-201ENST00000224237 MKNK1Q9BUB5 465 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 ABHD10Q9NUJ1 306 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.92■□□□□ 0.78
VIM-201ENST00000224237 PPME1Q9Y570 386 aa19.92■□□□□ 0.78
VIM-201ENST00000224237 NPTX2P47972 431 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 SNRPFP62306 86 aaKnown RBP19.91■□□□□ 0.78
VIM-201ENST00000224237 SREBF2Q12772 1141 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 MYBPC2Q14324 1141 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 TAPT1Q6NXT6 567 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 PLPPR4Q7Z2D5 763 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 SLC7A3Q8WY07 619 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 TTYH3Q9C0H2 523 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 DHX33Q9H6R0 707 aaKnown RBP19.91■□□□□ 0.78
VIM-201ENST00000224237 KMT5AQ9NQR1 393 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 CAPN11Q9UMQ6 739 aa19.91■□□□□ 0.78
VIM-201ENST00000224237 RBM47A0AV96 593 aaKnown RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 TTC26A0AVF1 554 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 CCDC169A6NNP5 214 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 SLC16A4O15374 487 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 TLR2O60603 784 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 RFC5P40937 340 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 C17orf99Q6UX52 265 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 SLC9A9Q8IVB4 645 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 TMEM161BQ8NDZ6 487 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 NPLOC4Q8TAT6 608 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 TMEM174Q8WUU8 243 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 GLG1Q92896 1179 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 IFT74Q96LB3 600 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 LUC7L2Q9Y383 392 aaKnown RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 TOMM70O94826 608 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 XRCC5P13010 732 aaKnown RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 ABCD1P33897 745 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 KRT9P35527 623 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 PSMC2P35998 433 aaKnown RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 SLC26A2P50443 739 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 CRHR2Q13324 411 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 LAMC2Q13753 1193 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 GJC2Q5T442 439 aaPredicted RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 MSL3Q8N5Y2 521 aaKnown RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 BBXQ8WY36 941 aaPredicted RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 KATNBL1Q9H079 304 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 POLR3FQ9H1D9 316 aaPredicted RBP19.9■□□□□ 0.78
VIM-201ENST00000224237 DMAC2Q9NW81 257 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 EXOC7Q9UPT5 735 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 SIK3Q9Y2K2 1263 aa19.9■□□□□ 0.78
VIM-201ENST00000224237 A0A1W2PQJ5 194 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 H0YCG3 227 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 FECHP22830 423 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 CASP4P49662 377 aa19.89■□□□□ 0.77
VIM-201ENST00000224237 SOX10P56693 466 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms