RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PTPN14Q15678 1187 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TRIM59Q8IWR1 403 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 DHX37Q8IY37 1157 aaKnown RBP21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 MCPH1Q8NEM0 835 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 KIFAP3Q92845 792 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 MAML3Q96JK9 1138 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ERGIC2Q96RQ1 377 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 KATNBL1Q9H079 304 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 GBP3Q9H0R5 595 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ST6GALNAC4Q9H4F1 302 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 VTA1Q9NP79 307 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 DIS3Q9Y2L1 958 aaKnown RBP21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 PAXBP1Q9Y5B6 917 aa21.63■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NRDCO43847 1150 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 RPL13P26373 211 aaKnown RBP21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 KCNJ6P48051 423 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NCKAP1LP55160 1127 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 INHBEP58166 350 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SYCP1Q15431 976 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 FAM160B1Q5W0V3 765 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 HAUS6Q7Z4H7 955 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SPATA33Q96N06 139 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ATP6V0A4Q9HBG4 840 aa21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF1A-201ENST00000162749 AKAP3O75969 853 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 GTF2BQ00403 316 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TRIM14Q14142 442 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NFIL3Q16649 462 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 FKBP15Q5T1M5 1219 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 HS2ST1Q7LGA3 356 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 BSNDQ8WZ55 320 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NIFKQ9BYG3 293 aaKnown RBP21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 C17orf75Q9HAS0 396 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 RNF225M0QZC1 329 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SLC16A4O15374 487 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TLR2O60603 784 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SNAI1O95863 264 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NPTX2P47972 431 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 DMP1Q13316 513 aaPredicted RBP21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 CNGA4Q8IV77 575 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 CEP89Q96ST8 783 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 AZI2Q9H6S1 392 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 EVPLQ92817 2033 aa21.61■■□□□ 1.05
TNFRSF1A-201ENST00000162749 LGR5O75473 907 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 CASP4P49662 377 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 KLK7P49862 253 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TRIM50Q86XT4 487 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 PANX2Q96RD6 677 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 DHX33Q9H6R0 707 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 AGPAT3Q9NRZ7 376 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ABT1Q9ULW3 272 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 MGAMO43451 1857 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SLC15A5A6NIM6 579 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ECM2O94769 699 aaPredicted RBP21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 POLGP54098 1239 aaPredicted RBP21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 EMC2Q15006 297 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 C17orf99Q6UX52 265 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 FRMD5Q7Z6J6 570 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SMC1BQ8NDV3 1235 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SLC17A8Q8NDX2 589 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ZNF592Q92610 1267 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 CCDC102AQ96A19 550 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 BAG1Q99933 345 aaPredicted RBP21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NTPCRQ9BSD7 190 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TTYH3Q9C0H2 523 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TMEM206Q9H813 350 aa21.6■■□□□ 1.05
TNFRSF1A-201ENST00000162749 EMSYQ7Z589 1322 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 RBM47A0AV96 593 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TTC26A0AVF1 554 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TPM1P09493 284 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SMTNP53814 917 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 RTP1P59025 263 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ARHGAP1Q07960 439 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TARBP2Q15633 366 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 GJC2Q5T442 439 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SYCP3Q8IZU3 236 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TMEM161BQ8NDZ6 487 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NPLOC4Q8TAT6 608 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 GLG1Q92896 1179 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TINF2Q9BSI4 451 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 KIFC3Q9BVG8 833 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ARMCX3Q9UH62 379 aaPredicted RBP21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 RASSF10A6NK89 507 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 CCDC169A6NNP5 214 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SLC16A3O15427 465 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 STX10O60499 249 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 GOLGA5Q8TBA6 731 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SPIRE2Q8WWL2 714 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 PPP1R13BQ96KQ4 1090 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 NRBP2Q9NSY0 501 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 SIK3Q9Y2K2 1263 aa21.59■■□□□ 1.05
TNFRSF1A-201ENST00000162749 TRIM21P19474 475 aaKnown RBP21.58■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ADCYAP1R1P41586 468 aa21.58■■□□□ 1.05
TNFRSF1A-201ENST00000162749 MORN1Q5T089 497 aa21.58■■□□□ 1.05
TNFRSF1A-201ENST00000162749 PLPPR4Q7Z2D5 763 aa21.58■■□□□ 1.05
TNFRSF1A-201ENST00000162749 CCDC155Q8N6L0 562 aa21.58■■□□□ 1.05
TNFRSF1A-201ENST00000162749 KMT5AQ9NQR1 393 aa21.58■■□□□ 1.05
TNFRSF1A-201ENST00000162749 ADGRA3Q8IWK6 1321 aa21.58■■□□□ 1.04
TNFRSF1A-201ENST00000162749 KAT6AQ92794 2004 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms