RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 FAM43BQ6ZT52 329 aaPredicted RBP21.5■■□□□ 1.03
SMN2-215ENST00000628696 Q6ZUG5 572 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 HFE2Q6ZVN8 426 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 REXO1Q8N1G1 1221 aaKnown RBP21.5■■□□□ 1.03
SMN2-215ENST00000628696 CCDC12Q8WUD4 166 aaPredicted RBP21.5■■□□□ 1.03
SMN2-215ENST00000628696 CRYGNQ8WXF5 182 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 ZMYND12Q9H0C1 365 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 HCSTQ9UBK5 93 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 GABBR1Q9UBS5 961 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 PCDHA10Q9Y5I2 948 aa21.5■■□□□ 1.03
SMN2-215ENST00000628696 MAFBQ9Y5Q3 323 aaPredicted RBP21.5■■□□□ 1.03
SMN2-215ENST00000628696 ESYT2A0FGR8 921 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 FGF18O76093 207 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 FGFR1P11362 822 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 SETQ01105 290 aaPredicted RBP21.49■■□□□ 1.03
SMN2-215ENST00000628696 AKAP17AQ02040 695 aaKnown RBP21.49■■□□□ 1.03
SMN2-215ENST00000628696 UBE3AQ05086 875 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 COASYQ13057 564 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 HERC4Q5GLZ8 1057 aaPredicted RBP21.49■■□□□ 1.03
SMN2-215ENST00000628696 MCTP2Q6DN12 878 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 SMAP1Q8IYB5 467 aaPredicted RBP21.49■■□□□ 1.03
SMN2-215ENST00000628696 COLGALT1Q8NBJ5 622 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 SMRP1Q8NCR6 262 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 TLR9Q9NR96 1032 aa21.49■■□□□ 1.03
SMN2-215ENST00000628696 GPR32O75388 356 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 GLP2RO95838 553 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 GNA11P29992 359 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 CLCN3P51790 818 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 ERVFC1P60507 584 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 RASGRP4Q8TDF6 673 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 BRF1Q92994 677 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 JAKMIP1Q96N16 626 aaKnown RBP21.48■■□□□ 1.03
SMN2-215ENST00000628696 TMEM161AQ9NX61 479 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 CEP131Q9UPN4 1083 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 AKT3Q9Y243 479 aa21.48■■□□□ 1.03
SMN2-215ENST00000628696 USP15Q9Y4E8 981 aaPredicted RBP21.48■■□□□ 1.03
SMN2-215ENST00000628696 PRPF3O43395 683 aaKnown RBP21.47■■□□□ 1.03
SMN2-215ENST00000628696 NLRP11P59045 1033 aaKnown RBP21.47■■□□□ 1.03
SMN2-215ENST00000628696 FAM189BP81408 668 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 RBM10P98175 930 aaKnown RBP21.47■■□□□ 1.03
SMN2-215ENST00000628696 PKN1Q16512 942 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 EFCAB12Q6NXP0 572 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 CENPQQ7L2Z9 268 aaPredicted RBP21.47■■□□□ 1.03
SMN2-215ENST00000628696 PHKBQ93100 1093 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 MFSD14AQ96MC6 490 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 FBXL18Q96ME1 805 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 MAP7D2Q96T17 732 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 TECTAO75443 2155 aa21.47■■□□□ 1.03
SMN2-215ENST00000628696 MAGEB2O15479 319 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 ZSCAN20P17040 1043 aaPredicted RBP21.46■■□□□ 1.03
SMN2-215ENST00000628696 LAG3P18627 525 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 DSC3Q14574 896 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 BLOC1S2Q6QNY1 142 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 LRRC71Q8N4P6 559 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 EDAQ92838 391 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 ZNF668Q96K58 619 aaPredicted RBP21.46■■□□□ 1.03
SMN2-215ENST00000628696 FAM167AQ96KS9 214 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 CWH43Q9H720 699 aa21.46■■□□□ 1.03
SMN2-215ENST00000628696 PIEZO1Q92508 2521 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 TMOD1P28289 359 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 DUSP6Q16828 381 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 PLPP4Q5VZY2 271 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 RNF169Q8NCN4 708 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 BICD2Q8TD16 824 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 RPGRIP1Q96KN7 1286 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 TMEM117Q9H0C3 514 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 ELAC1Q9H777 363 aaKnown RBP21.45■■□□□ 1.02
SMN2-215ENST00000628696 NRBP2Q9NSY0 501 aa21.45■■□□□ 1.02
SMN2-215ENST00000628696 ZNF318Q5VUA4 2279 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 WDR64B1ANS9 1081 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 LOC730098B7Z3J9 87 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 CIITAP33076 1130 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 NHLH1Q02575 133 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 PDE12Q6L8Q7 609 aaKnown RBP21.44■■□□□ 1.02
SMN2-215ENST00000628696 ABI1Q8IZP0 508 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 VN1R2Q8NFZ6 395 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 SCLT1Q96NL6 688 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 CDCA3Q99618 268 aaPredicted RBP21.44■■□□□ 1.02
SMN2-215ENST00000628696 PHF7Q9BWX1 381 aaPredicted RBP21.44■■□□□ 1.02
SMN2-215ENST00000628696 SLC26A6Q9BXS9 759 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 KCNH6Q9H252 994 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 ENTPD7Q9NQZ7 604 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 DISC1Q9NRI5 854 aa21.44■■□□□ 1.02
SMN2-215ENST00000628696 PUF60Q9UHX1 559 aaKnown RBP21.44■■□□□ 1.02
SMN2-215ENST00000628696 FSCN2O14926 492 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 HOXA2O43364 376 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 CHMP2AO43633 222 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 EIF4BP23588 611 aaKnown RBP21.43■■□□□ 1.02
SMN2-215ENST00000628696 LRRC55Q6ZSA7 311 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 CCDC148Q8NFR7 591 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 MRPS27Q92552 414 aaKnown RBP21.43■■□□□ 1.02
SMN2-215ENST00000628696 LENG9Q96B70 501 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 CCDC136Q96JN2 1154 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 CASD1Q96PB1 797 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 ADAMTS10Q9H324 1103 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 VPS54Q9P1Q0 977 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 SNX14Q9Y5W7 946 aa21.43■■□□□ 1.02
SMN2-215ENST00000628696 FSD2A1L4K1 749 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 TMEM221A6NGB7 291 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 M0R296 226 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms