RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CNNM3Q8NE01 707 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 RAVER2Q9HCJ3 691 aaKnown RBP12.78□□□□□ -0.36
LINC00538-201ENST00000626109 COMMD8Q9NX08 183 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 TBK1Q9UHD2 729 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 EGFL7Q9UHF1 273 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 CCPG1Q9ULG6 757 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 IPPQ9Y573 584 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 A0A0G2JMZ2 1700 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 SERPINC1P01008 464 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 XBP1P17861 261 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 POU3F3P20264 500 aaPredicted RBP12.78□□□□□ -0.36
LINC00538-201ENST00000626109 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
LINC00538-201ENST00000626109 PLS1Q14651 629 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 ARID5BQ14865 1188 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 PKN1Q16512 942 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 RILPL1Q5EBL4 403 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 C11orf74Q86VG3 221 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
LINC00538-201ENST00000626109 GJB4Q9NTQ9 266 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 RABL2AQ9UBK7 228 aaPredicted RBP12.78□□□□□ -0.36
LINC00538-201ENST00000626109 KCNH3Q9ULD8 1083 aa12.78□□□□□ -0.36
LINC00538-201ENST00000626109 ZNF536O15090 1300 aa12.77□□□□□ -0.36
LINC00538-201ENST00000626109 A0A087WWV3 80 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 ATP2A1O14983 1001 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 CA12O43570 354 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 ABCD1P33897 745 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 UBASH3AP57075 661 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 NCAPHQ15003 741 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 USH1GQ495M9 461 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 ARSHQ5FYA8 562 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 SNRNP48Q6IEG0 339 aaKnown RBP12.77□□□□□ -0.37
LINC00538-201ENST00000626109 SHC4Q6S5L8 630 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 TMC7Q7Z402 723 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 NOSTRINQ8IVI9 506 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 ARL10Q8N8L6 244 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
LINC00538-201ENST00000626109 IPCEF1Q8WWN9 437 aaPredicted RBP12.77□□□□□ -0.37
LINC00538-201ENST00000626109 GPKOWQ92917 476 aaPredicted RBP eCLIP12.77□□□□□ -0.37
LINC00538-201ENST00000626109 ERO1AQ96HE7 468 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 NEUROD4Q9HD90 331 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 TRMT1Q9NXH9 659 aaKnown RBP12.77□□□□□ -0.37
LINC00538-201ENST00000626109 BTBD7Q9P203 1132 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 ZNF214Q9UL59 606 aaPredicted RBP12.77□□□□□ -0.37
LINC00538-201ENST00000626109 PCDHB8Q9UN66 801 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 PCDHA1Q9Y5I3 950 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 ABCB11O95342 1321 aa12.77□□□□□ -0.37
LINC00538-201ENST00000626109 PPP1R11O60927 126 aaPredicted RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 TPPPO94811 219 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 AGR2O95994 175 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 MMP1P03956 469 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 STAT3P40763 770 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ST13P50502 369 aaKnown RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 NAPAP54920 295 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 BRSK2Q8IWQ3 736 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 CCDC148Q8NFR7 591 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 UHMK1Q8TAS1 419 aaKnown RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 COA7Q96BR5 231 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 AIFM3Q96NN9 605 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 SPATC1LQ9H0A9 340 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ABCG4Q9H172 646 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 DCAF16Q9NXF7 216 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 OGFRQ9NZT2 677 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 RBPJLQ9UBG7 517 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 STXBP3O00186 592 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 TLR2O60603 784 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 CNMDO75829 334 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ALAS1P13196 640 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 PSMA3P25788 255 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ERVK-24P63145 666 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 CCNA1P78396 465 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 PTK7Q13308 1070 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 CRHR2Q13324 411 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 FAM110CQ1W6H9 321 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 ZNF579Q8NAF0 562 aaKnown RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 GPRC5AQ8NFJ5 357 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 TRMT2BQ96GJ1 504 aaKnown RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 DEPDC7Q96QD5 511 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 TRIM6Q9C030 488 aaPredicted RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 TXNRD2Q9NNW7 524 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 VPS54Q9P1Q0 977 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 MORF4L1Q9UBU8 362 aa12.76□□□□□ -0.37
LINC00538-201ENST00000626109 MRPL11Q9Y3B7 192 aaKnown RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 MAGED1Q9Y5V3 778 aaPredicted RBP12.76□□□□□ -0.37
LINC00538-201ENST00000626109 USP27XA6NNY8 438 aa12.75□□□□□ -0.37
LINC00538-201ENST00000626109 SLU7O95391 586 aaKnown RBP12.75□□□□□ -0.37
LINC00538-201ENST00000626109 VARSP26640 1264 aaKnown RBP12.75□□□□□ -0.37
LINC00538-201ENST00000626109 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
LINC00538-201ENST00000626109 RIOX2Q8IUF8 465 aa12.75□□□□□ -0.37
LINC00538-201ENST00000626109 LILRB2Q8N423 598 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms