RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CBX1P83916 185 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 GFPT1Q06210 699 aaPredicted RBP21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 TMCO3Q6UWJ1 677 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 TRIM58Q8NG06 486 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 KLRG1Q96E93 195 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 GBP3Q9H0R5 595 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 DMAC2Q9NW81 257 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 FAM53CQ9NYF3 392 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 RNF181Q9P0P0 153 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 HDAC6Q9UBN7 1215 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 FZD1Q9UP38 647 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 PPP2R3BQ9Y5P8 575 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 DSG3P32926 999 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 RAPGEF1Q13905 1077 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 BAATQ14032 418 aaPredicted RBP21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 KLHDC7AQ5VTJ3 777 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 TCERG1LQ5VWI1 586 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 GBP6Q6ZN66 633 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 KSR1Q8IVT5 923 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 FAM186BQ8IYM0 893 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 GOLGA5Q8TBA6 731 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 AGPAT3Q9NRZ7 376 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 GGA3Q9NZ52 723 aa21.61■■□□□ 1.05
PCDHB11-202ENST00000624887 PPP1R12BO60237 982 aaPredicted RBP21.6■■□□□ 1.05
PCDHB11-202ENST00000624887 TACC1O75410 805 aa21.6■■□□□ 1.05
PCDHB11-202ENST00000624887 ZRANB2O95218 330 aaKnown RBP eCLIP21.6■■□□□ 1.05
PCDHB11-202ENST00000624887 MAPTP10636 758 aaKnown RBP21.6■■□□□ 1.05
PCDHB11-202ENST00000624887 ACTN1P12814 892 aa21.6■■□□□ 1.05
PCDHB11-202ENST00000624887 UCHL3P15374 230 aa21.6■■□□□ 1.05
PCDHB11-202ENST00000624887 FBXL5Q9UKA1 691 aa21.6■■□□□ 1.05
PCDHB11-202ENST00000624887 POTEB2H3BUK9 544 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 ATP9AO75110 1047 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 JAK3P52333 1124 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 BMS1Q14692 1282 aaKnown RBP21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 COG2Q14746 738 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 ASIC2Q16515 512 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 SNRNP48Q6IEG0 339 aaKnown RBP21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 C4orf19Q8IY42 314 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 LARSQ9P2J5 1176 aaKnown RBP21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 ZNF214Q9UL59 606 aaPredicted RBP21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 JRKLQ9Y4A0 524 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 DDNO94850 711 aaPredicted RBP21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 SFNP31947 248 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 KRT76Q01546 638 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 KLHL30Q0D2K2 578 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 VSIG10LQ86VR7 867 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 SLC9A9Q8IVB4 645 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 FAM133AQ8N9E0 248 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 MSANTD4Q8NCY6 345 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 ANKZF1Q9H8Y5 726 aa21.59■■□□□ 1.05
PCDHB11-202ENST00000624887 SSC5DA1L4H1 1573 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 TESPA1A2RU30 521 aaPredicted RBP21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 WDR64B1ANS9 1081 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 ATP2A1O14983 1001 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 CCND2P30279 289 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 YWHABP31946 246 aaKnown RBP21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 ALCAMQ13740 583 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 SLC18A3Q16572 532 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 NOL9Q5SY16 702 aaKnown RBP21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 MLXIPQ9HAP2 919 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 LUC7LQ9NQ29 371 aaKnown RBP21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 CAPN6Q9Y6Q1 641 aa21.58■■□□□ 1.05
PCDHB11-202ENST00000624887 CCNE2O96020 404 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 HIRAP54198 1017 aaPredicted RBP21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 PSMC5P62195 406 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 MYBPC2Q14324 1141 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 CATSPERGQ6ZRH7 1159 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 GPRASP2Q96D09 838 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 TIPINQ9BVW5 301 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 SIX2Q9NPC8 291 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 GCNT4Q9P109 453 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 FRMD4BQ9Y2L6 1034 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 FHOD1Q9Y613 1164 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 K7ENM7 598 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 MAFGO15525 162 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 NR3C2P08235 984 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 TMEM132BQ14DG7 1078 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 UGCGQ16739 394 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 CC2D1AQ6P1N0 951 aaPredicted RBP21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 IRF2BP2Q7Z5L9 587 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 RNF10Q8N5U6 811 aaKnown RBP21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 RDM1Q8NG50 284 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 ALS2CR12Q96Q35 445 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 SPAG5Q96R06 1193 aa21.57■■□□□ 1.04
PCDHB11-202ENST00000624887 CCDC151A5D8V7 595 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 SRGAP2O75044 1071 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 MOCS3O95396 460 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 PLS3P13797 630 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 ARID5AQ03989 594 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 BRD3Q15059 726 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 SUPT20HL1Q3ZLR7 823 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 C9orf131Q5VYM1 1079 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 MAEAQ7L5Y9 396 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 SYCP3Q8IZU3 236 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 TMEM174Q8WUU8 243 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 TMEM206Q9H813 350 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 TMOD4Q9NZQ9 345 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 TCEAL9Q9UHQ7 104 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 RAB21Q9UL25 225 aa21.56■■□□□ 1.04
PCDHB11-202ENST00000624887 BZW2Q9Y6E2 419 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms