RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 IL9RQ01113 521 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 KRT76Q01546 638 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 ITPK1Q13572 414 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 E2F4Q16254 413 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 ERICH1Q86X53 443 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 KCTD6Q8NC69 237 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 FAM213AQ9BRX8 229 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 TRIM9Q9C026 710 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 CXorf56Q9H5V9 222 aa13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 CNOT8Q9UFF9 292 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-206ENST00000612899 MYO1EQ12965 1108 aa13.46□□□□□ -0.26
TNFAIP3-206ENST00000612899 BBS9Q3SYG4 887 aa13.46□□□□□ -0.26
TNFAIP3-206ENST00000612899 LXNQ9BS40 222 aa13.46□□□□□ -0.26
TNFAIP3-206ENST00000612899 EPC1Q9H2F5 836 aa13.46□□□□□ -0.26
TNFAIP3-206ENST00000612899 RGL1Q9NZL6 768 aa13.46□□□□□ -0.26
TNFAIP3-206ENST00000612899 SUN1O94901 812 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 TRIM49P0CI25 452 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 TRIM49CP0CI26 452 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 ARL4AP40617 200 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 ORC2Q13416 577 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 TMED2Q15363 201 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 CDO1Q16878 200 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 DARS2Q6PI48 645 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 DNAAF3Q8N9W5 541 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SH2D3AQ9BRG2 576 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 ATP6V0A4Q9HBG4 840 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SMYD2Q9NRG4 433 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 GABBR1Q9UBS5 961 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 FLT1P17948 1338 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SLC20A2Q08357 652 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 IQCB1Q15051 598 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 MAPK6Q16659 721 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 CCDC38Q502W7 563 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 ZNF746Q6NUN9 644 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SWSAP1Q6NVH7 229 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 WHAMMQ8TF30 809 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SNX24Q9Y343 169 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 PPRC1Q5VV67 1664 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 RASGRF2O14827 1237 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 PRPSAP2O60256 369 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 NTSR2O95665 410 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 USP11P51784 963 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SURF1Q15526 300 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 ANKRD40Q6AI12 368 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 PPP1R2P3Q6NXS1 205 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 CATSPER4Q7RTX7 472 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 CCDC68Q9H2F9 335 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 ABCA9Q8IUA7 1624 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 LDHAP00338 332 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 GSTA1P08263 222 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 GSTA2P09210 222 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SLC8A1P32418 973 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 GYS2P54840 703 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 C4orf50Q6ZRC1 276 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 CCDC197Q8NCU1 140 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 SH3GL3Q99963 347 aa13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 IRX2Q9BZI1 471 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-206ENST00000612899 CCDC188H7C350 402 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 HIP1RO75146 1068 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 ACSL3O95573 720 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 ZNF18P17022 549 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 FMR1Q06787 632 aaKnown RBP eCLIP13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 SPATS2Q86XZ4 545 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 HEMGNQ9BXL5 484 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 CCSER1Q9C0I3 900 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 HDAC6Q9UBN7 1215 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 DRAP1Q14919 205 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 EMBQ6PCB8 327 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 TMEM270Q6UE05 265 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 ADAMTS13Q76LX8 1427 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 DCLK2Q8N568 766 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 SAAL1Q96ER3 474 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 FBXO40Q9UH90 709 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 HERC5Q9UII4 1024 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 CTDNEP1O95476 244 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 ECE1P42892 770 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 MSH2P43246 934 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 SLMAPQ14BN4 828 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 SBK1Q52WX2 424 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 CEP55Q53EZ4 464 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 NAALADL2Q58DX5 795 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 ZNF512BQ96KM6 892 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 ZWILCHQ9H900 591 aa13.44□□□□□ -0.26
TNFAIP3-206ENST00000612899 IRAK4Q9NWZ3 460 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms