RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 RB1P06400 928 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 CDC42EP1Q00587 391 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 TBC1D8BQ0IIM8 1120 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 TARBP2Q15633 366 aaKnown RBP20.48■□□□□ 0.87
VCX3A-203ENST00000612369 AAK1Q2M2I8 961 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 KIZQ2M2Z5 673 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 TMEM40Q8WWA1 233 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 TNFRSF25Q93038 417 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 TMX1Q9H3N1 280 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 C1orf112Q9NSG2 853 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 ST3GAL5Q9UNP4 418 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 AKT3Q9Y243 479 aa20.48■□□□□ 0.87
VCX3A-203ENST00000612369 C5orf67F2Z3F1 127 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 MARCH6O60337 910 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 DTNBO60941 627 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 VTNP04004 478 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 CLCN3P51790 818 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 PSMC5P62195 406 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 NR5A1Q13285 461 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 BTG3Q14201 252 aaPredicted RBP20.47■□□□□ 0.87
VCX3A-203ENST00000612369 PTPROQ16827 1216 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 TMEM266Q2M3C6 531 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 C8orf34Q49A92 452 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 SLFN12Q8IYM2 578 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 CLP1Q92989 425 aaKnown RBP20.47■□□□□ 0.87
VCX3A-203ENST00000612369 OSMRQ99650 979 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 VAV3Q9UKW4 847 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 RALGAPA2Q2PPJ7 1873 aa20.47■□□□□ 0.87
VCX3A-203ENST00000612369 REV3LO60673 3130 aa20.46■□□□□ 0.87
VCX3A-203ENST00000612369 BAG4O95429 457 aaKnown RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 SARSP49591 514 aaKnown RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 NLRP11P59045 1033 aaKnown RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 GPM6BQ13491 265 aa20.46■□□□□ 0.87
VCX3A-203ENST00000612369 EARS2Q5JPH6 523 aaKnown RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 CMTR2Q8IYT2 770 aaKnown RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 LRRC71Q8N4P6 559 aa20.46■□□□□ 0.87
VCX3A-203ENST00000612369 HAS1Q92839 578 aa20.46■□□□□ 0.87
VCX3A-203ENST00000612369 MRPL38Q96DV4 380 aaKnown RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 ZSCAN31Q96LW9 406 aaPredicted RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 LLPHQ9BRT6 129 aaKnown RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 RGS18Q9NS28 235 aa20.46■□□□□ 0.87
VCX3A-203ENST00000612369 SEPT9Q9UHD8 586 aaPredicted RBP20.46■□□□□ 0.87
VCX3A-203ENST00000612369 NLRC5Q86WI3 1866 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 DENND3A2RUS2 1198 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 JAK2O60674 1132 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 STBD1O95210 358 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 P4HBP07237 508 aaKnown RBP20.45■□□□□ 0.86
VCX3A-203ENST00000612369 BMPR1AP36894 532 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 QARSP47897 775 aaKnown RBP20.45■□□□□ 0.86
VCX3A-203ENST00000612369 DNM2P50570 870 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 MTERF2Q49AM1 385 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 SLC24A5Q71RS6 500 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 FAM228AQ86W67 206 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 DIS3L2Q8IYB7 885 aaKnown RBP20.45■□□□□ 0.86
VCX3A-203ENST00000612369 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 HLA-CQ95604 372 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 ADAM2Q99965 735 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 JPH2Q9BR39 696 aaPredicted RBP20.45■□□□□ 0.86
VCX3A-203ENST00000612369 ADAMTS10Q9H324 1103 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 LRFN2Q9ULH4 789 aa20.45■□□□□ 0.86
VCX3A-203ENST00000612369 IGKV6-21A0A0C4DH24 114 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 DDX11L8A8MPP1 907 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 BTBD18B2RXH4 712 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 EML1O00423 815 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 LINC00271P0C7V0 271 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 EIF4BP23588 611 aaKnown RBP20.44■□□□□ 0.86
VCX3A-203ENST00000612369 GPC3P51654 580 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 ST3GAL1Q11201 340 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 EPHA7Q15375 998 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 EXOC8Q8IYI6 725 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 BANK1Q8NDB2 785 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 CEP89Q96ST8 783 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 PPP1R16BQ96T49 567 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 C11orf84Q9BUA3 381 aaPredicted RBP20.44■□□□□ 0.86
VCX3A-203ENST00000612369 PLVAPQ9BX97 442 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 SH2B1Q9NRF2 756 aaPredicted RBP20.44■□□□□ 0.86
VCX3A-203ENST00000612369 PPME1Q9Y570 386 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 PCDHB7Q9Y5E2 793 aa20.44■□□□□ 0.86
VCX3A-203ENST00000612369 MAFO75444 373 aaPredicted RBP20.43■□□□□ 0.86
VCX3A-203ENST00000612369 CTNNB1P35222 781 aa20.43■□□□□ 0.86
VCX3A-203ENST00000612369 SAFBQ15424 915 aaKnown RBP eCLIP20.43■□□□□ 0.86
VCX3A-203ENST00000612369 TIGD5Q53EQ6 642 aa20.43■□□□□ 0.86
VCX3A-203ENST00000612369 KIF2CQ99661 725 aa20.43■□□□□ 0.86
VCX3A-203ENST00000612369 LMAN2LQ9H0V9 348 aa20.43■□□□□ 0.86
VCX3A-203ENST00000612369 ELAC1Q9H777 363 aaKnown RBP20.43■□□□□ 0.86
VCX3A-203ENST00000612369 FAM205CA6NFA0 338 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 C9IYK1 514 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 MGEA5O60502 916 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 ZSCAN20P17040 1043 aaPredicted RBP20.42■□□□□ 0.86
VCX3A-203ENST00000612369 RBM25P49756 843 aaKnown RBP20.42■□□□□ 0.86
VCX3A-203ENST00000612369 FAM189BP81408 668 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 HMGN5P82970 282 aaKnown RBP20.42■□□□□ 0.86
VCX3A-203ENST00000612369 NAALADL2Q58DX5 795 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 ANO5Q75V66 913 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 CCDC83Q8IWF9 413 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 C4orf19Q8IY42 314 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 P2RX5Q93086 422 aa20.42■□□□□ 0.86
VCX3A-203ENST00000612369 TTC28Q96AY4 2481 aa20.41■□□□□ 0.86
VCX3A-203ENST00000612369 DARSP14868 501 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms