RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TMEM150BA6NC51 233 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 ZBTB39O15060 712 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 SLC26A4O43511 780 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 ACRP10323 421 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 INSRRP14616 1297 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 ADAM17P78536 824 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 PPFIA1Q13136 1202 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 CLEC17AQ6ZS10 378 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 C7orf31Q8N865 590 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 SEZ6LQ9BYH1 1024 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 SETD4Q9NVD3 440 aa21.06■□□□□ 0.96
CCDC9-205ENST00000600117 A0A087WWV3 80 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 DDX11L8A8MPP1 907 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 UBA7P41226 1012 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 TARBP2Q15633 366 aaKnown RBP21.05■□□□□ 0.96
CCDC9-205ENST00000600117 GRIK4Q16099 956 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 TMEM119Q4V9L6 283 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 FAM47CQ5HY64 1035 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 GDF6Q6KF10 455 aaPredicted RBP21.05■□□□□ 0.96
CCDC9-205ENST00000600117 TRMT1LQ7Z2T5 733 aaKnown RBP21.05■□□□□ 0.96
CCDC9-205ENST00000600117 HERVK_113Q902F9 699 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 CEP89Q96ST8 783 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 NIFKQ9BYG3 293 aaKnown RBP21.05■□□□□ 0.96
CCDC9-205ENST00000600117 MTIF3Q9H2K0 278 aaKnown RBP21.05■□□□□ 0.96
CCDC9-205ENST00000600117 SLC28A3Q9HAS3 691 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 NRBP2Q9NSY0 501 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 KIAA1024Q9UPX6 916 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 ARIH1Q9Y4X5 557 aaPredicted RBP21.05■□□□□ 0.96
CCDC9-205ENST00000600117 COL1A2P08123 1366 aa21.05■□□□□ 0.96
CCDC9-205ENST00000600117 TRIP12Q14669 1992 aaPredicted RBP21.05■□□□□ 0.96
CCDC9-205ENST00000600117 NRCAMQ92823 1304 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 KDM3AQ9Y4C1 1321 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 C17orf102A2RUQ5 167 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 BMP1P13497 986 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 YWHABP31946 246 aaKnown RBP21.04■□□□□ 0.96
CCDC9-205ENST00000600117 ZNF200P98182 395 aaPredicted RBP21.04■□□□□ 0.96
CCDC9-205ENST00000600117 KARSQ15046 597 aaKnown RBP21.04■□□□□ 0.96
CCDC9-205ENST00000600117 ZNF484Q5JVG2 852 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 MARCH8Q5T0T0 291 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 PLA2G4FQ68DD2 849 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 ADALQ6DHV7 355 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 KCNK18Q7Z418 384 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 FAM126BQ8IXS8 530 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 PIGOQ8TEQ8 1089 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 LRRC15Q8TF66 581 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 LMBR1Q8WVP7 490 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 TRAPPC12Q8WVT3 735 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 CTAGE1Q96RT6 745 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 PPP1R12CQ9BZL4 782 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 NKX2-4Q9H2Z4 354 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 IL23AQ9NPF7 189 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 ANKEF1Q9NU02 776 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 DDX19AQ9NUU7 478 aaKnown RBP21.04■□□□□ 0.96
CCDC9-205ENST00000600117 SEPT9Q9UHD8 586 aaPredicted RBP21.04■□□□□ 0.96
CCDC9-205ENST00000600117 PRRC2BQ5JSZ5 2229 aaKnown RBP21.04■□□□□ 0.96
CCDC9-205ENST00000600117 KAT6AQ92794 2004 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 ARID2Q68CP9 1835 aa21.04■□□□□ 0.96
CCDC9-205ENST00000600117 RRN3P2A6NIE6 340 aa21.03■□□□□ 0.96
CCDC9-205ENST00000600117 TLR3O15455 904 aaKnown RBP21.03■□□□□ 0.96
CCDC9-205ENST00000600117 XRCC6P12956 609 aaKnown RBP eCLIP21.03■□□□□ 0.96
CCDC9-205ENST00000600117 RESP18Q5W5W9 173 aa21.03■□□□□ 0.96
CCDC9-205ENST00000600117 NECAB3Q96P71 396 aaPredicted RBP21.03■□□□□ 0.96
CCDC9-205ENST00000600117 NACC1Q96RE7 527 aa21.03■□□□□ 0.96
CCDC9-205ENST00000600117 SH2D3AQ9BRG2 576 aa21.03■□□□□ 0.96
CCDC9-205ENST00000600117 MUC6Q6W4X9 2439 aa21.03■□□□□ 0.96
CCDC9-205ENST00000600117 A0A087X0B3 334 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 MBLAC1A4D2B0 266 aaPredicted RBP21.02■□□□□ 0.96
CCDC9-205ENST00000600117 B4GALT4O60513 344 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 CD4P01730 458 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 PLCG1P19174 1290 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 NPEPPSP55786 919 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 IGBP1P78318 339 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 ZRSR1Q15695 479 aaKnown RBP21.02■□□□□ 0.96
CCDC9-205ENST00000600117 AAK1Q2M2I8 961 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 KCTD17Q8N5Z5 321 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 TMEM87AQ8NBN3 555 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 ZBTB10Q96DT7 871 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 CALML4Q96GE6 196 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 PLIN2Q99541 437 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 NT5C3AQ9H0P0 336 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 TRPV6Q9H1D0 765 aa21.02■□□□□ 0.96
CCDC9-205ENST00000600117 TRMT13Q9NUP7 481 aaKnown RBP21.02■□□□□ 0.96
CCDC9-205ENST00000600117 DBR1Q9UK59 544 aaKnown RBP21.02■□□□□ 0.96
CCDC9-205ENST00000600117 A0A1W2PQ27 194 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 A0A1W2PQ64 194 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 A0A1W2PQD8 194 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 E9PMD0 336 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 TREHO43280 583 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 CYP2C18P33260 490 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 TXLNAP40222 546 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 RARRES1P49788 294 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 MTERF2Q49AM1 385 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 OTUD6AQ7L8S5 288 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 CYP26B1Q9NR63 512 aa21.01■□□□□ 0.95
CCDC9-205ENST00000600117 YBX2Q9Y2T7 364 aaKnown RBP21.01■□□□□ 0.95
CCDC9-205ENST00000600117 FAM237AA0A1B0GTK4 181 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 C22orf31O95567 290 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 EYA4O95677 639 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 FGBP02675 491 aa21■□□□□ 0.95
CCDC9-205ENST00000600117 GNAT1P11488 350 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms