RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 NAALADL2Q58DX5 795 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 ZNF746Q6NUN9 644 aaPredicted RBP15.52■□□□□ 0.08
HDAC5-208ENST00000588419 LRRC71Q8N4P6 559 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 CCDC148Q8NFR7 591 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 POP1Q99575 1024 aaKnown RBP15.52■□□□□ 0.08
HDAC5-208ENST00000588419 AAASQ9NRG9 546 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 MUTYHQ9UIF7 546 aa15.52■□□□□ 0.08
HDAC5-208ENST00000588419 PER2O15055 1255 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 PRPF3O43395 683 aaKnown RBP15.51■□□□□ 0.07
HDAC5-208ENST00000588419 RPS6KB1P23443 525 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 CRYBB1P53674 252 aaPredicted RBP15.51■□□□□ 0.07
HDAC5-208ENST00000588419 ADAM15Q13444 863 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 SLC24A5Q71RS6 500 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
HDAC5-208ENST00000588419 CRIPAKQ8N1N5 446 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 RNF169Q8NCN4 708 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 BICD2Q8TD16 824 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
HDAC5-208ENST00000588419 ATP6V0A4Q9HBG4 840 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 NCOA5Q9HCD5 579 aaKnown RBP15.51■□□□□ 0.07
HDAC5-208ENST00000588419 RGS18Q9NS28 235 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 CEP131Q9UPN4 1083 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 PCDHA10Q9Y5I2 948 aa15.51■□□□□ 0.07
HDAC5-208ENST00000588419 NID2Q14112 1375 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 WDR64B1ANS9 1081 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 HSPA4P34932 840 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 NLRP5P59047 1200 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 PRKCEQ02156 737 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 PLPP4Q5VZY2 271 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 MCTP2Q6DN12 878 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 EFCAB12Q6NXP0 572 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 COLGALT1Q8NBJ5 622 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 CRYGNQ8WXF5 182 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 GJA10Q969M2 543 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 CCDC136Q96JN2 1154 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 FAM167AQ96KS9 214 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 TLE6Q9H808 572 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 TLR9Q9NR96 1032 aa15.5■□□□□ 0.07
HDAC5-208ENST00000588419 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
HDAC5-208ENST00000588419 MAFBQ9Y5Q3 323 aaPredicted RBP15.5■□□□□ 0.07
HDAC5-208ENST00000588419 C19orf67A6NJJ6 358 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 C9IYK1 514 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 GAS7O60861 476 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 GPR32O75388 356 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 FGF18O76093 207 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 GLP2RO95838 553 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 OATP04181 439 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 FGFR4P22455 802 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 TMOD1P28289 359 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 CA8P35219 290 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 NLRP11P59045 1033 aaKnown RBP15.49■□□□□ 0.07
HDAC5-208ENST00000588419 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
HDAC5-208ENST00000588419 ABI1Q8IZP0 508 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 EFHBQ8N7U6 833 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 TEKT3Q9BXF9 490 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 RNF26Q9BY78 433 aaPredicted RBP15.49■□□□□ 0.07
HDAC5-208ENST00000588419 DISC1Q9NRI5 854 aa15.49■□□□□ 0.07
HDAC5-208ENST00000588419 TYW1Q9NV66 732 aaKnown RBP15.49■□□□□ 0.07
HDAC5-208ENST00000588419 ARID2Q68CP9 1835 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 MSH4O15457 936 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 MAGEB2O15479 319 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 ZSCAN20P17040 1043 aaPredicted RBP15.48■□□□□ 0.07
HDAC5-208ENST00000588419 LAG3P18627 525 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 PSMA5P28066 241 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 PBX3P40426 434 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 UGCGQ16739 394 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 LRCH2Q5VUJ6 765 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 LLGL2Q6P1M3 1020 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 RNF135Q8IUD6 432 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 NLRP7Q8WX94 980 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 LENG9Q96B70 501 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 MSLNLQ96KJ4 702 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 APOL5Q9BWW9 433 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 ENTPD7Q9NQZ7 604 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 TMEM161AQ9NX61 479 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 CLEC1BQ9P126 229 aa15.48■□□□□ 0.07
HDAC5-208ENST00000588419 SEPT9Q9UHD8 586 aaPredicted RBP15.48■□□□□ 0.07
HDAC5-208ENST00000588419 USP15Q9Y4E8 981 aaPredicted RBP15.48■□□□□ 0.07
HDAC5-208ENST00000588419 CIITAP33076 1130 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 ERVFC1P60507 584 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 STK3Q13188 491 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 MTERF2Q49AM1 385 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 TRIM22Q8IYM9 498 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 SMRP1Q8NCR6 262 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 KCNB2Q92953 911 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 LARP6Q9BRS8 491 aaKnown RBP15.47■□□□□ 0.07
HDAC5-208ENST00000588419 UNC45AQ9H3U1 944 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 CWH43Q9H720 699 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 NRBP2Q9NSY0 501 aa15.47■□□□□ 0.07
HDAC5-208ENST00000588419 CPLX1O14810 134 aa15.46■□□□□ 0.07
HDAC5-208ENST00000588419 ZNF862O60290 1169 aa15.46■□□□□ 0.07
HDAC5-208ENST00000588419 REC8O95072 547 aa15.46■□□□□ 0.07
HDAC5-208ENST00000588419 TDP2O95551 362 aa15.46■□□□□ 0.07
HDAC5-208ENST00000588419 IFNAR1P17181 557 aa15.46■□□□□ 0.07
HDAC5-208ENST00000588419 SP100P23497 879 aaPredicted RBP15.46■□□□□ 0.07
HDAC5-208ENST00000588419 PDIA3P30101 505 aaKnown RBP15.46■□□□□ 0.07
HDAC5-208ENST00000588419 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
HDAC5-208ENST00000588419 UBE3AQ05086 875 aa15.46■□□□□ 0.07
HDAC5-208ENST00000588419 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms