RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ZNF503-AS2A6NEH8 195 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 C2orf71A6NGG8 1288 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 PDPK1O15530 556 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 CEP104O60308 925 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 VAMP4O75379 141 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 TADA3O75528 432 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 KCNH1O95259 989 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 PSMD7P51665 324 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 RTP1P59025 263 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 UBE2HP62256 183 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 GNAI1P63096 354 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 SNCBQ16143 134 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 KIAA0753Q2KHM9 967 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 HSF5Q4G112 596 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 TIGD5Q53EQ6 642 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 PLEKHO1Q53GL0 409 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 GORABQ5T7V8 394 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 SFMBT2Q5VUG0 894 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 CAPRIN2Q6IMN6 1127 aaKnown RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 MTHFD1LQ6UB35 978 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 CEP128Q6ZU80 1094 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 NOL8Q76FK4 1167 aaKnown RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 YTHDF3Q7Z739 585 aaKnown RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 IRF2BP1Q8IU81 584 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 RNF168Q8IYW5 571 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 AFAP1Q8N556 730 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 CCDC150Q8NCX0 1101 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 TRIM58Q8NG06 486 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 FAM76AQ8TAV0 307 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 LMBR1Q8WVP7 490 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 ARHGAP45Q92619 1136 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 CCDC47Q96A33 483 aaKnown RBP6.82□□□□□ -1.32
SMAD4-203ENST00000585448 TRIM4Q9C037 500 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 KLC4Q9NSK0 619 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 SWAP70Q9UH65 585 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 DNAI1Q9UI46 699 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 TMEM98Q9Y2Y6 226 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 ANKRD50Q9ULJ7 1429 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 SYNMO15061 1565 aa6.82□□□□□ -1.32
SMAD4-203ENST00000585448 BCORL1Q5H9F3 1711 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 RPGRIP1LQ68CZ1 1315 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 ZNF644Q9H582 1327 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 FNTAP49354 379 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 SEPHS1P49903 392 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 PAPOLAP51003 745 aaKnown RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 ZBED6P86452 979 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 CYP4F3Q08477 520 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 SNX1Q13596 522 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 CUL3Q13618 768 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 E4F1Q66K89 784 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 TTLL7Q6ZT98 887 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 APBB1IPQ7Z5R6 666 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 LUZP1Q86V48 1076 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 ANKRD13BQ86YJ7 626 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 KSR1Q8IVT5 923 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 LRRC8AQ8IWT6 810 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 ELOA2Q8IYF1 753 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 LRRC47Q8N1G4 583 aaKnown RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 NAT16Q8N8M0 369 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 CNNM3Q8NE01 707 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 PPP1R14BQ96C90 147 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 INTS4Q96HW7 963 aaKnown RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 RBM41Q96IZ5 413 aaKnown RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 FAM81BQ96LP2 452 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 RUFY1Q96T51 708 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 MMP19Q99542 508 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 SLC6A17Q9H1V8 727 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 LUC7LQ9NQ29 371 aaKnown RBP6.81□□□□□ -1.32
SMAD4-203ENST00000585448 GGA2Q9UJY4 613 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 FAN1Q9Y2M0 1017 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 CAPN7Q9Y6W3 813 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 FHOD3Q2V2M9 1422 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 KDM5CP41229 1560 aa6.81□□□□□ -1.32
SMAD4-203ENST00000585448 WDR33Q9C0J8 1336 aaKnown RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 GOLGA6L7A0A1B0GV03 622 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 A0A1W2PQU0 124 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 H3BQF6 201 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 STXBP3O00186 592 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 HRKO00198 91 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 CREB3O43889 395 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 PSPNO60542 156 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 SHOX2O60902 331 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 KRT38O76015 456 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 TPPPO94811 219 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 PNLIPP16233 465 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 ZFXP17010 805 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 FOXD4Q12950 439 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 PABPC4Q13310 644 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 LAPTM5Q13571 262 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 KCNB1Q14721 858 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 SLC14A2Q15849 920 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 LONRF2Q1L5Z9 754 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 LONRF3Q496Y0 759 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 NUGGCQ68CJ6 796 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 SARM1Q6SZW1 724 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 ARMC9Q7Z3E5 817 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 ERMNQ8TAM6 284 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 AFAP1L1Q8TED9 768 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms