RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 SH3GL2Q99962 352 aa11.45□□□□□ -0.58
RNF43-207ENST00000583753 STMN4Q9H169 189 aaPredicted RBP11.45□□□□□ -0.58
RNF43-207ENST00000583753 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
RNF43-207ENST00000583753 ARHGEF35A5YM69 484 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 FOXO6A8MYZ6 492 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 SHBGP04278 402 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 PDHA1P08559 390 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 GCLMP48507 274 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 USP11P51784 963 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 INTS5Q6P9B9 1019 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 ANO3Q9BYT9 981 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 HOMER2Q9NSB8 354 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 CNOT8Q9UFF9 292 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 CCNL1Q9UK58 526 aaPredicted RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 CCDC188H7C350 402 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 DLATP10515 647 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 FERP16591 822 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 PAX7P23759 505 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 CASP5P51878 434 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 KNOP1Q1ED39 458 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 PPP4R3AQ6IN85 833 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 SEPT14Q6ZU15 432 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 STXBP4Q6ZWJ1 553 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 C18orf8Q96DM3 657 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 SPDL1Q96EA4 605 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 SGSM3Q96HU1 749 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 KLHL14Q9P2G3 628 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 ARHGAP23Q9P227 1491 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 PRLRP16471 622 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 SKOR1P84550 965 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 MYL7Q01449 175 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 ITGB3BPQ13352 177 aaPredicted RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 TMED2Q15363 201 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 ECM1Q16610 540 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 C2CD6Q53TS8 623 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 LRCH2Q5VUJ6 765 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 ZNF653Q96CK0 615 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 STAMBPL1Q96FJ0 436 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 IFT74Q96LB3 600 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 CCDC77Q9BR77 488 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 REEP2Q9BRK0 252 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 DHX36Q9H2U1 1008 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 VPS37BQ9H9H4 285 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 GDF3Q9NR23 364 aa11.44□□□□□ -0.58
RNF43-207ENST00000583753 BZW2Q9Y6E2 419 aaKnown RBP11.44□□□□□ -0.58
RNF43-207ENST00000583753 K7ENM7 598 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 SUN1O94901 812 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 UPP2O95045 317 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 FTLP02792 175 aaPredicted RBP11.43□□□□□ -0.58
RNF43-207ENST00000583753 FIGNQ5HY92 759 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 FBXO33Q7Z6M2 555 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 CNPY4Q8N129 248 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 PROM2Q8N271 834 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 NSMCE1Q8WV22 266 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 SCFD1Q8WVM8 642 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 SEMA4AQ9H3S1 761 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 BCAS3Q9H6U6 928 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 NOD2Q9HC29 1040 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 MYH2Q9UKX2 1941 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 LRRC37A3O60309 1634 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 TOM1O60784 492 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 SHOX2O60902 331 aaPredicted RBP11.43□□□□□ -0.58
RNF43-207ENST00000583753 SPAG7O75391 227 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 CCDC137Q6PK04 289 aaKnown RBP11.43□□□□□ -0.58
RNF43-207ENST00000583753 PRCCQ92733 491 aaPredicted RBP11.43□□□□□ -0.58
RNF43-207ENST00000583753 ECT2Q9H8V3 914 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 SERPINB13Q9UIV8 391 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 PNMA6FA0A0J9YX94 578 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 GAS7O60861 476 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 MED24O75448 989 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 TTLL1O95922 423 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 FECHP22830 423 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
RNF43-207ENST00000583753 SMTNP53814 917 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 LRRC55Q6ZSA7 311 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 RFX8Q6ZV50 586 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 FUKQ8N0W3 1084 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 NEDD1Q8NHV4 660 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 HAUS1Q96CS2 278 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 THAP2Q9H0W7 228 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 TTC7AQ9ULT0 858 aaPredicted RBP11.43□□□□□ -0.58
RNF43-207ENST00000583753 NR2E1Q9Y466 385 aa11.43□□□□□ -0.58
RNF43-207ENST00000583753 TUBGCP6Q96RT7 1819 aa11.42□□□□□ -0.58
RNF43-207ENST00000583753 DNM1LO00429 736 aa11.42□□□□□ -0.58
RNF43-207ENST00000583753 HIP1RO75146 1068 aa11.42□□□□□ -0.58
RNF43-207ENST00000583753 AKAP3O75969 853 aa11.42□□□□□ -0.58
RNF43-207ENST00000583753 BCRP11274 1271 aa11.42□□□□□ -0.58
RNF43-207ENST00000583753 LMNB1P20700 586 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms