RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GLT1D1Q96MS3 346 aa10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 MTG1Q9BT17 334 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 TRPV6Q9H1D0 765 aa10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 PRO3102Q9H379 93 aa10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 PDLIM7Q9NR12 457 aa10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 NOVA2Q9UNW9 492 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 NR2E3Q9Y5X4 410 aa10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 ELP1O95163 1332 aa10.73□□□□□ -0.69
NPLOC4-219ENST00000576713 LTBP2Q14767 1821 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 SCN10AQ9Y5Y9 1956 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 CDH23Q9H251 3354 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 A0A0U1RQG5 324 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 CCDC194A0A1B0GVG4 234 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 B4GALT4O60513 344 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 CD4P01730 458 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 XBP1P17861 261 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 TCF7P36402 384 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 TOB1P50616 345 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 CHMP4BP1P59074 171 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 ACTR2P61160 394 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 ZNF200P98182 395 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 DPYDQ12882 1025 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 NEDD9Q14511 834 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 DGKDQ16760 1214 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 Q4G0T1 1027 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 PKDCCQ504Y2 493 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 HABP4Q5JVS0 413 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 B3GNT9Q6UX72 402 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 ANKRD33Q7Z3H0 272 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 NEK8Q86SG6 692 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 MEIOBQ8N635 442 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 FAM184AQ8NB25 1140 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 RETREG2Q8NC44 543 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 TPCN2Q8NHX9 752 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 HAS1Q92839 578 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 SLC5A5Q92911 643 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 WNT8BQ93098 351 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 VTI1AQ96AJ9 217 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 ZBTB10Q96DT7 871 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 ZNF577Q9BSK1 485 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 JPH1Q9HDC5 661 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 TRMT13Q9NUP7 481 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 NFASCO94856 1347 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 UMODL1Q5DID0 1318 aa10.72□□□□□ -0.69
NPLOC4-219ENST00000576713 MAFGO15525 162 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 PPFIA4O75335 1185 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 PSMD10O75832 226 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 STAU1O95793 577 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 U2AF2P26368 475 aaKnown RBP eCLIP10.71□□□□□ -0.696e-21■■□□□ 11.5
NPLOC4-219ENST00000576713 TRIM29Q14134 588 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 KIAA0753Q2KHM9 967 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 GDF6Q6KF10 455 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 ABHD15Q6UXT9 468 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 CCDC60Q8IWA6 550 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 HOMEZQ8IX15 550 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 CDHR1Q96JP9 859 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 TMEM60Q9H2L4 133 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 UNC45AQ9H3U1 944 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 RNPEPQ9H4A4 650 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 HDAC6Q9UBN7 1215 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 SLC9A2Q9UBY0 812 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 DDX25Q9UHL0 483 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
NPLOC4-219ENST00000576713 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.7
NPLOC4-219ENST00000576713 CEP290O15078 2479 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 IGKV6D-21A0A0A0MT36 114 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 TMEM229AB2RXF0 380 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 H3BRB1 525 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 EML1O00423 815 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 ZEB2O60315 1214 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 CCNT1O60563 726 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 LGR5O75473 907 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 CABYRO75952 493 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 CYP2C9P11712 490 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 ATP2B1P20020 1258 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 ATP4AP20648 1035 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 MARK3P27448 753 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 HOXC8P31273 242 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 PTGIRP43119 386 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 SETQ01105 290 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 SPIRE1Q08AE8 756 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 UGCGQ16739 394 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 PPP4R3AQ6IN85 833 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 MOXD1Q6UVY6 613 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 NOSTRINQ8IVI9 506 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 STK32AQ8WU08 396 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 SEPT1Q8WYJ6 367 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 DHX38Q92620 1227 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 VWCEQ96DN2 955 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 FOXP1Q9H334 677 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 TUT1Q9H6E5 874 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 VAV3Q9UKW4 847 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 TBX21Q9UL17 535 aa10.7□□□□□ -0.7
NPLOC4-219ENST00000576713 CHMP2AO43633 222 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 KPNA6O60684 536 aa10.69□□□□□ -0.7
NPLOC4-219ENST00000576713 CLTBP09497 229 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms