RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 MGAT3Q09327 533 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
TRIM25-205ENST00000572021 PDIA5Q14554 519 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 PTPAQ15257 358 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
TRIM25-205ENST00000572021 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 SNX29Q8TEQ0 813 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 RNPC3Q96LT9 517 aaKnown RBP13.3□□□□□ -0.28
TRIM25-205ENST00000572021 PLIN2Q99541 437 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 MMTAG2Q9BU76 263 aaKnown RBP13.3□□□□□ -0.28
TRIM25-205ENST00000572021 POLR3CQ9BUI4 534 aaPredicted RBP13.3□□□□□ -0.28
TRIM25-205ENST00000572021 TUFT1Q9NNX1 390 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 AKT3Q9Y243 479 aa13.3□□□□□ -0.28
TRIM25-205ENST00000572021 ZBBXA8MT70 800 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 MAGEB2O15479 319 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 RPA1P27694 616 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 RFC2P35250 354 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 KIZQ2M2Z5 673 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 HABP4Q5JVS0 413 aaKnown RBP13.29□□□□□ -0.28
TRIM25-205ENST00000572021 FAM26DQ5JW98 314 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 RPAINQ86UA6 219 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 LINC01465Q8N7H1 131 aa13.29□□□□□ -0.28
TRIM25-205ENST00000572021 CAND2O75155 1236 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 MAFO75444 373 aaPredicted RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 LYPLA2O95372 231 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 CXCL10P02778 98 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 POLGP54098 1239 aaPredicted RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 LPIN1Q14693 890 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 SPECC1Q5M775 1068 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 L1TD1Q5T7N2 865 aaKnown RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 IER5Q5VY09 327 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 ARL6IP4Q66PJ3 421 aaKnown RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 PSRC1Q6PGN9 363 aaPredicted RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 TMEM143Q96AN5 459 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 CLIC6Q96NY7 704 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 RAB34Q9BZG1 259 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 DDX19AQ9NUU7 478 aaKnown RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 KIAA1024Q9UPX6 916 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 TRPV2Q9Y5S1 764 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 FSD2A1L4K1 749 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 M0QZ92 97 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 SOX1O00570 391 aaPredicted RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 BMP15O95972 392 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 RARRES1P49788 294 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 NLRP11P59045 1033 aaKnown RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 EMC2Q15006 297 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 KRT79Q5XKE5 535 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 HAUS3Q68CZ6 603 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 TMCO2Q7Z6W1 182 aaPredicted RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 KSR1Q8IVT5 923 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 NME8Q8N427 588 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 TMEM40Q8WWA1 233 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 HERVK_113Q902F9 699 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 CCDC43Q96MW1 224 aaKnown RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 OSMRQ99650 979 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 AGO3Q9H9G7 860 aaKnown RBP13.28□□□□□ -0.28
TRIM25-205ENST00000572021 POLD4Q9HCU8 107 aa13.28□□□□□ -0.28
TRIM25-205ENST00000572021 IGKV6-21A0A0C4DH24 114 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 GRXCR1A8MXD5 290 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 E9PMD0 336 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 USO1O60763 962 aaKnown RBP13.27□□□□□ -0.29
TRIM25-205ENST00000572021 GPR32O75388 356 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 CSDE1O75534 798 aaKnown RBP13.27□□□□□ -0.29
TRIM25-205ENST00000572021 TMOD1P28289 359 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 CD52P31358 61 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.29
TRIM25-205ENST00000572021 PLEKHG4Q58EX7 1191 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 CNKSR3Q6P9H4 555 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 KCNK18Q7Z418 384 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 RHPN2Q8IUC4 686 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 TMEM87AQ8NBN3 555 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 SLC7A3Q8WY07 619 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 NACC1Q96RE7 527 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
TRIM25-205ENST00000572021 CSRNP2Q9H175 543 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
TRIM25-205ENST00000572021 XPNPEP1Q9NQW7 623 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 SUCLA2Q9P2R7 463 aaPredicted RBP13.27□□□□□ -0.29
TRIM25-205ENST00000572021 FBXO2Q9UK22 296 aaPredicted RBP13.27□□□□□ -0.29
TRIM25-205ENST00000572021 ATP6V1DQ9Y5K8 247 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 PTPRSQ13332 1948 aa13.27□□□□□ -0.29
TRIM25-205ENST00000572021 PARNO95453 639 aaKnown RBP13.26□□□□□ -0.29
TRIM25-205ENST00000572021 MBD3O95983 291 aa13.26□□□□□ -0.29
TRIM25-205ENST00000572021 PFKMP08237 780 aa13.26□□□□□ -0.29
TRIM25-205ENST00000572021 RFC5P40937 340 aa13.26□□□□□ -0.29
TRIM25-205ENST00000572021 NASPP49321 788 aaPredicted RBP13.26□□□□□ -0.29
TRIM25-205ENST00000572021 GRB10Q13322 594 aa13.26□□□□□ -0.29
TRIM25-205ENST00000572021 SLC39A14Q15043 492 aa13.26□□□□□ -0.29
TRIM25-205ENST00000572021 STK38Q15208 465 aa13.26□□□□□ -0.29
TRIM25-205ENST00000572021 CABP7Q86V35 215 aa13.26□□□□□ -0.29
TRIM25-205ENST00000572021 LRCH3Q96II8 777 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms