RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 VAV3Q9UKW4 847 aa16.52■□□□□ 0.24
FANCA-220ENST00000566409 ST3GAL5Q9UNP4 418 aa16.52■□□□□ 0.24
FANCA-220ENST00000566409 CEP131Q9UPN4 1083 aa16.52■□□□□ 0.24
FANCA-220ENST00000566409 FNDC1Q4ZHG4 1894 aaPredicted RBP16.51■□□□□ 0.23
FANCA-220ENST00000566409 MAGEB2O15479 319 aa16.51■□□□□ 0.23
FANCA-220ENST00000566409 MRPS5P82675 430 aaKnown RBP16.51■□□□□ 0.23
FANCA-220ENST00000566409 NFX1Q12986 1120 aaKnown RBP16.51■□□□□ 0.23
FANCA-220ENST00000566409 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
FANCA-220ENST00000566409 FIBCD1Q8N539 461 aa16.51■□□□□ 0.23
FANCA-220ENST00000566409 OSMRQ99650 979 aa16.51■□□□□ 0.23
FANCA-220ENST00000566409 SH2D3AQ9BRG2 576 aa16.51■□□□□ 0.23
FANCA-220ENST00000566409 ADAMTS10Q9H324 1103 aa16.51■□□□□ 0.23
FANCA-220ENST00000566409 ADGRA3Q8IWK6 1321 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 H3BNC9 293 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 CCNT1O60563 726 aaKnown RBP16.5■□□□□ 0.23
FANCA-220ENST00000566409 EIF5BO60841 1220 aaKnown RBP16.5■□□□□ 0.23
FANCA-220ENST00000566409 RPS6KA5O75582 802 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
FANCA-220ENST00000566409 DRP2Q13474 957 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 SKIV2LQ15477 1246 aaKnown RBP16.5■□□□□ 0.23
FANCA-220ENST00000566409 FAM228AQ86W67 206 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 BANK1Q8NDB2 785 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 WASF1Q92558 559 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 CLP1Q92989 425 aaKnown RBP16.5■□□□□ 0.23
FANCA-220ENST00000566409 SAMD11Q96NU1 681 aa16.5■□□□□ 0.23
FANCA-220ENST00000566409 NIFKQ9BYG3 293 aaKnown RBP16.5■□□□□ 0.23
FANCA-220ENST00000566409 BTBD18B2RXH4 712 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 WNT7AO00755 349 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 BMP1P13497 986 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 GCFC2P16383 781 aaKnown RBP16.49■□□□□ 0.23
FANCA-220ENST00000566409 KRT2P35908 639 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 GATMP50440 423 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 KCNQ1P51787 676 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 NLRP11P59045 1033 aaKnown RBP16.49■□□□□ 0.23
FANCA-220ENST00000566409 PPP2R5CQ13362 524 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 GPM6BQ13491 265 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 ANO5Q75V66 913 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 NPAS4Q8IUM7 802 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
FANCA-220ENST00000566409 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
FANCA-220ENST00000566409 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
FANCA-220ENST00000566409 WRAP73Q9P2S5 460 aaPredicted RBP16.49■□□□□ 0.23
FANCA-220ENST00000566409 IGKV6-21A0A0C4DH24 114 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 C5orf67F2Z3F1 127 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 MMP1P03956 469 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 BMPR1AP36894 532 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 FOSBP53539 338 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 SPIRE1Q08AE8 756 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 BTG3Q14201 252 aaPredicted RBP16.48■□□□□ 0.23
FANCA-220ENST00000566409 DSC3Q14574 896 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 XKR3Q5GH77 459 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 MRPL38Q96DV4 380 aaKnown RBP16.48■□□□□ 0.23
FANCA-220ENST00000566409 ADAM2Q99965 735 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 RGS18Q9NS28 235 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 SEPT9Q9UHD8 586 aaPredicted RBP16.48■□□□□ 0.23
FANCA-220ENST00000566409 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 AKT3Q9Y243 479 aa16.48■□□□□ 0.23
FANCA-220ENST00000566409 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
FANCA-220ENST00000566409 C9IYK1 514 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 TBX3O15119 743 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 GPR182O15218 404 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 TMOD1P28289 359 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 CTNNB1P35222 781 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 SARSP49591 514 aaKnown RBP16.47■□□□□ 0.23
FANCA-220ENST00000566409 GPC3P51654 580 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 TBC1D8BQ0IIM8 1120 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 MTERF2Q49AM1 385 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
FANCA-220ENST00000566409 HLA-CQ95604 372 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 COG5Q9UP83 839 aa16.47■□□□□ 0.23
FANCA-220ENST00000566409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.46■□□□□ 0.23
FANCA-220ENST00000566409 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 GRM6O15303 877 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 RB1P06400 928 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 IBSPP21815 317 aaPredicted RBP16.46■□□□□ 0.23
FANCA-220ENST00000566409 EIF4BP23588 611 aaKnown RBP16.46■□□□□ 0.23
FANCA-220ENST00000566409 PSMC5P62195 406 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 FAM189BP81408 668 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 CAMK1Q14012 370 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.23
FANCA-220ENST00000566409 FAM102BQ5T8I3 360 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 PLA2G4FQ68DD2 849 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 SLC24A5Q71RS6 500 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 CCDC83Q8IWF9 413 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 DIS3L2Q8IYB7 885 aaKnown RBP16.46■□□□□ 0.23
FANCA-220ENST00000566409 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.23
FANCA-220ENST00000566409 ADAMTS19Q8TE59 1207 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 MAP7D2Q96T17 732 aa16.46■□□□□ 0.23
FANCA-220ENST00000566409 ARID2Q68CP9 1835 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 DENND3A2RUS2 1198 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 MAFO75444 373 aaPredicted RBP16.45■□□□□ 0.22
FANCA-220ENST00000566409 CSDE1O75534 798 aaKnown RBP16.45■□□□□ 0.22
FANCA-220ENST00000566409 STAG3L1P0CL83 205 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 DARSP14868 501 aaKnown RBP16.45■□□□□ 0.22
FANCA-220ENST00000566409 QARSP47897 775 aaKnown RBP16.45■□□□□ 0.22
FANCA-220ENST00000566409 NPEPPSP55786 919 aa16.45■□□□□ 0.22
FANCA-220ENST00000566409 FAM43BQ6ZT52 329 aaPredicted RBP16.45■□□□□ 0.22
FANCA-220ENST00000566409 NECAB3Q96P71 396 aaPredicted RBP16.45■□□□□ 0.22
FANCA-220ENST00000566409 NAP1L4Q99733 375 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms