RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 GTPBP6O43824 516 aaPredicted RBP15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 RPN1P04843 607 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 AKR1B1P15121 316 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 CHN1P15882 459 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 FLT3P36888 993 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 LACTBP83111 547 aaPredicted RBP15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 RASSF7Q02833 373 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 ADAM9Q13443 819 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 CCDC38Q502W7 563 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 FAM163AQ96GL9 167 aaPredicted RBP15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 PLIN2Q99541 437 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 NEUROG2Q9H2A3 272 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 TSKSQ9UJT2 592 aa15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 DDX60LQ5H9U9 1706 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-203ENST00000562609 PP2D1A8MPX8 630 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 PLSCR1O15162 318 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 RAD21O60216 631 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 FTCDO95954 541 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 MSH2P43246 934 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 POLE2P56282 527 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 TNNC1P63316 161 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 MRPS35P82673 323 aaKnown RBP15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 SHROOM1Q2M3G4 852 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 SLF2Q8IX21 1173 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 LMNTD2Q8IXW0 634 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 PROCA1Q8NCQ7 364 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 ANKS1AQ92625 1134 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 MOV10L1Q9BXT6 1211 aaKnown RBP15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 PCDHA4Q9UN74 947 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 VIMP08670 466 aaKnown RBP15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 IMPDH2P12268 514 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 ALDH1B1P30837 517 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 ATP2C1P98194 919 aaPredicted RBP15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 CENPTQ96BT3 561 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 PIGSQ96S52 555 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 SELENOSQ9BQE4 189 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 TCP11L1Q9NUJ3 509 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 RMND1Q9NWS8 449 aa15.23■□□□□ 0.03
GTF3C1-203ENST00000562609 CCDC194A0A1B0GVG4 234 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 SART1O43290 800 aaKnown RBP15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 TMC4Q7Z404 712 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 ADSSL1Q8N142 457 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 MASTLQ96GX5 879 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 PDGFDQ9GZP0 370 aaPredicted RBP15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 MTFR1LQ9H019 292 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 THAP9Q9H5L6 903 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 PCMTD2Q9NV79 361 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 PCDHA6Q9UN73 950 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 PACSIN2Q9UNF0 486 aaPredicted RBP15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 PCDHA8Q9Y5H6 950 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 ADAMTSL1Q8N6G6 1762 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 SETSIPP0DME0 302 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 CUL1Q13616 776 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 PDXDC2PQ6P474 469 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 FERMT2Q96AC1 680 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 TMEM60Q9H2L4 133 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 PLAGL2Q9UPG8 496 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 CD2APQ9Y5K6 639 aa15.22■□□□□ 0.03
GTF3C1-203ENST00000562609 GRID2IPA4D2P6 1211 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 HIP1RO75146 1068 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 SHBGP04278 402 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 MYBP10242 640 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 MAGEA8P43361 318 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 NAPAP54920 295 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 MTMR3Q13615 1198 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 RNF220Q5VTB9 566 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 CDC42EP5Q6NZY7 148 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 TMEM154Q6P9G4 183 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 GPCPD1Q9NPB8 672 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 ZSCAN9O15535 394 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 PALMO75781 387 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 ATL2Q8NHH9 583 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 ANKRD27Q96NW4 1050 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 INPP4AQ96PE3 977 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 RPS6KC1Q96S38 1066 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 BARHL2Q9NY43 387 aa15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 ZMYND8Q9ULU4 1186 aaPredicted RBP15.21■□□□□ 0.03
GTF3C1-203ENST00000562609 LGR5O75473 907 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 CALML3P27482 149 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 GNAQP50148 359 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 COPS2P61201 443 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 GFPT1Q06210 699 aaPredicted RBP15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 USP38Q8NB14 1042 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 TLCD1Q96CP7 247 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 TRIM33Q9UPN9 1127 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 LRRC42Q9Y546 428 aa15.21■□□□□ 0.02
GTF3C1-203ENST00000562609 SLC1A4P43007 532 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 SCNN1BP51168 640 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 ZNF131P52739 623 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 EHHADHQ08426 723 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 APOBEC3HQ6NTF7 200 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 COA7Q96BR5 231 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 PLEKHG4BQ96PX9 1271 aa15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 UBE2OQ9C0C9 1292 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-203ENST00000562609 RAB17Q9H0T7 212 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms