RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PFKFB2O60825 505 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 MBD3O95983 291 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 CCT2P78371 535 aaKnown RBP7.78□□□□□ -1.16
SPG11-224ENST00000561268 LSM11P83369 360 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPG11-224ENST00000561268 SCRN1Q12765 414 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 CUL4AQ13619 759 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 Q4G0T1 1027 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 FAM160B1Q5W0V3 765 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 MTHFD1LQ6UB35 978 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 RSPH3Q86UC2 560 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 TRIM22Q8IYM9 498 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 MYOCDQ8IZQ8 938 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 TRAPPC12Q8WVT3 735 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 BBXQ8WY36 941 aaPredicted RBP7.78□□□□□ -1.16
SPG11-224ENST00000561268 ANP32BQ92688 251 aaKnown RBP7.78□□□□□ -1.16
SPG11-224ENST00000561268 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
SPG11-224ENST00000561268 KHSRPQ92945 711 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPG11-224ENST00000561268 ASB2Q96Q27 587 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 CEP89Q96ST8 783 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 PHF20Q9BVI0 1012 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 FTHL17Q9BXU8 183 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 KCNMB3Q9NPA1 279 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 PLXNA3P51805 1871 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 KMT2EQ8IZD2 1858 aa7.78□□□□□ -1.16
SPG11-224ENST00000561268 BDP1A6H8Y1 2624 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 WDR64B1ANS9 1081 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 RFXAPO00287 272 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 MSH4O15457 936 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 GTPBP6O43824 516 aaPredicted RBP7.77□□□□□ -1.17
SPG11-224ENST00000561268 CTDNEP1O95476 244 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 SFNP31947 248 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 AKAP17AQ02040 695 aaKnown RBP7.77□□□□□ -1.17
SPG11-224ENST00000561268 ST3GAL1Q11201 340 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 TARBP2Q15633 366 aaKnown RBP7.77□□□□□ -1.17
SPG11-224ENST00000561268 PRR16Q569H4 304 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 ZNF484Q5JVG2 852 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 KRT40Q6A162 431 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 MIS18BP1Q6P0N0 1132 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 KIAA0319LQ8IZA0 1049 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 BLIDQ8IZY5 108 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 NME8Q8N427 588 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 TBCKQ8TEA7 893 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 TMEM40Q8WWA1 233 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 ARNTL2Q8WYA1 636 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 TNFRSF25Q93038 417 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 ZBTB10Q96DT7 871 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 FAM167AQ96KS9 214 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 AIFM3Q96NN9 605 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 C17orf80Q9BSJ5 609 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 ZNF577Q9BSK1 485 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 TMX1Q9H3N1 280 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 ERVK-5Q9HDB9 667 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 ZNF302Q9NR11 478 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 TPCN1Q9ULQ1 816 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 COG5Q9UP83 839 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 PCDHA10Q9Y5I2 948 aa7.77□□□□□ -1.17
SPG11-224ENST00000561268 VWA8A3KMH1 1905 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 DOCK8Q8NF50 2099 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 IGKV6-21A0A0C4DH24 114 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 H3BNC9 293 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 DDX39AO00148 427 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 GPR32O75388 356 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 DGKIO75912 1065 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 CDKL5O76039 1030 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 STBD1O95210 358 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 BAG4O95429 457 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 LARGE1O95461 756 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 TDP2O95551 362 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 PSAPP07602 524 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 BMP1P13497 986 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 GCFC2P16383 781 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 IGFBP4P22692 258 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 CD52P31358 61 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 ZNF76P36508 570 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 JAK3P52333 1124 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 MRPS5P82675 430 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 PRKCEQ02156 737 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 SSRP1Q08945 709 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 SPIRE1Q08AE8 756 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 PPP2R5CQ13362 524 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 DSC3Q14574 896 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 UGCGQ16739 394 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 EPC2Q52LR7 807 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 TIGD5Q53EQ6 642 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 IER5Q5VY09 327 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 PPP4R3AQ6IN85 833 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 PDXDC2PQ6P474 469 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 CPLX2Q6PUV4 134 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 KRT25Q7Z3Z0 450 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 RTN4RL1Q86UN2 441 aaPredicted RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 NPAS4Q8IUM7 802 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 CMTR2Q8IYT2 770 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 FBXO22Q8NEZ5 403 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 GTF3C6Q969F1 213 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 MRPL38Q96DV4 380 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 YME1L1Q96TA2 773 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 CELF4Q9BZC1 486 aaKnown RBP7.76□□□□□ -1.17
SPG11-224ENST00000561268 LMAN2LQ9H0V9 348 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 UNC45AQ9H3U1 944 aa7.76□□□□□ -1.17
SPG11-224ENST00000561268 CERS4Q9HA82 394 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms