RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 MAPTP10636 758 aaKnown RBP12.5□□□□□ -0.41
SNX1-212ENST00000560861 CYP2C19P33261 490 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 PLCB4Q15147 1175 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 PRAMEF19Q5SWL8 479 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 TRIM50Q86XT4 487 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 TRPV1Q8NER1 839 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 ZNF507Q8TCN5 953 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 KCNN1Q92952 543 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 MRFAP1L1Q96HT8 127 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 ST6GALNAC4Q9H4F1 302 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 DHX33Q9H6R0 707 aaKnown RBP12.5□□□□□ -0.41
SNX1-212ENST00000560861 TBC1D7Q9P0N9 293 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
SNX1-212ENST00000560861 NRBP1Q9UHY1 535 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 ZHX1Q9UKY1 873 aaPredicted RBP12.5□□□□□ -0.41
SNX1-212ENST00000560861 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 ZMYM2Q9UBW7 1377 aa12.5□□□□□ -0.41
SNX1-212ENST00000560861 UBE4BO95155 1302 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 SFI1A8K8P3 1242 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 EIF3DO15371 548 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX1-212ENST00000560861 DGAT1O75907 488 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 LGALS2P05162 132 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 MYBP10242 640 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 PLS3P13797 630 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 CDC25BP30305 580 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 NMT1P30419 496 aaKnown RBP12.49□□□□□ -0.41
SNX1-212ENST00000560861 SLC26A2P50443 739 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 RTP1P59025 263 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 TPM4P67936 248 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 FANCCQ00597 558 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 SP3Q02447 781 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 LRRC63Q05C16 580 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 POTEHQ6S545 545 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 LRRC55Q6ZSA7 311 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 ZNF720Q7Z2F6 126 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 ATP8B4Q8TF62 1192 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 AFG1LQ8WV93 481 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
SNX1-212ENST00000560861 BSNDQ8WZ55 320 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 TRIB2Q92519 343 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 FAM167AQ96KS9 214 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 CEP170P1Q96L14 293 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 C16orf70Q9BSU1 422 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 GPRC5CQ9NQ84 441 aa12.49□□□□□ -0.41
SNX1-212ENST00000560861 IGKV6-21A0A0C4DH24 114 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 BICDL2A1A5D9 508 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 LRRC10BA6NIK2 292 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 NOP56O00567 594 aaKnown RBP12.48□□□□□ -0.41
SNX1-212ENST00000560861 TRPA1O75762 1119 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 MMP3P08254 477 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 CYBAP13498 195 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 RFC5P40937 340 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 FLT3LGP49771 235 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 TNFAIP2Q03169 654 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 PRKCZQ05513 592 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 EMC2Q15006 297 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.48□□□□□ -0.41
SNX1-212ENST00000560861 TNS4Q8IZW8 715 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 MYCT1Q8N699 235 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 MCPH1Q8NEM0 835 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
SNX1-212ENST00000560861 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 DRC1Q96MC2 740 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 SMARCAD1Q9H4L7 1026 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 THAP9Q9H5L6 903 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 AZI2Q9H6S1 392 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 ATP6V0A4Q9HBG4 840 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 NRBP2Q9NSY0 501 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 WBP1LQ9NX94 342 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 LIMA1Q9UHB6 759 aaKnown RBP12.48□□□□□ -0.41
SNX1-212ENST00000560861 TRAF3IP3Q9Y228 551 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 Q9Y3F1 56 aa12.48□□□□□ -0.41
SNX1-212ENST00000560861 EVPLQ92817 2033 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 A6NJR5 290 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 PPFIA4O75335 1185 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
SNX1-212ENST00000560861 PRPF6O94906 941 aaKnown RBP12.47□□□□□ -0.41
SNX1-212ENST00000560861 ARL2P36404 184 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 NKX3-2P78367 333 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 ODR4Q5SWX8 454 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 OR6J1Q8NGC5 347 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 KIFAP3Q92845 792 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 CCDC43Q96MW1 224 aaKnown RBP12.47□□□□□ -0.41
SNX1-212ENST00000560861 NTPCRQ9BSD7 190 aaKnown RBP12.47□□□□□ -0.41
SNX1-212ENST00000560861 TRIM5Q9C035 493 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 XPO4Q9C0E2 1151 aaKnown RBP12.47□□□□□ -0.41
SNX1-212ENST00000560861 MRPL44Q9H9J2 332 aaKnown RBP12.47□□□□□ -0.41
SNX1-212ENST00000560861 C17orf75Q9HAS0 396 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 SAGE1Q9NXZ1 904 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 IFNKQ9P0W0 207 aa12.47□□□□□ -0.41
SNX1-212ENST00000560861 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
SNX1-212ENST00000560861 ADGRA3Q8IWK6 1321 aa12.46□□□□□ -0.41
SNX1-212ENST00000560861 A0A1B0GTH6 734 aa12.46□□□□□ -0.41
SNX1-212ENST00000560861 GPR25O00155 361 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 351.6 ms