RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MFAP3LO75121 409 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF18P17022 549 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 VCLP18206 1134 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 RAB44Q7Z6P3 723 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 WRNIP1Q96S55 665 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CDRT15Q96T59 188 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 FMO2Q99518 471 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ERP44Q9BS26 406 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TAF1DQ9H5J8 278 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 DNAAF2Q9NVR5 837 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ORC6Q9Y5N6 252 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PSMD14O00487 310 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 FMR1Q06787 632 aaKnown RBP eCLIP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PRPF3O43395 683 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 S100A1P23297 94 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 KCNJ2P63252 427 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 STAT4Q14765 748 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PAGE2BQ5JRK9 111 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 FRA10AC1Q70Z53 315 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 SNX5Q9Y5X3 404 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TMEM120BA0PK00 339 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 NOTOA8MTQ0 251 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 F8W031 263 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TNNC2P02585 160 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CMTM5Q96DZ9 223 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 NEU2Q9Y3R4 380 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ITIH4Q14624 930 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TRAPPC9Q96Q05 1148 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 IL1RAPL1Q9NZN1 696 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC189A1A4V9 331 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 P4HA2O15460 535 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PTPN4P29074 926 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 GALNT17Q6IS24 598 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PRPF39Q86UA1 669 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 NAP1L4Q99733 375 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 LRRC10BA6NIK2 292 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CENPXA8MT69 81 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CAPN9O14815 690 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TBC1D9BQ66K14 1250 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ATP8A2Q9NTI2 1148 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF219Q9P2Y4 722 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 EME2A4GXA9 379 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ECE1P42892 770 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 VCPKMTQ9H867 229 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ZWILCHQ9H900 591 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 PJA2O43164 708 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 OCRLQ01968 901 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 DMC1Q14565 340 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CDR2LQ86X02 465 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC134Q9H6E4 229 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 DCLRE1BQ9H816 532 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CCNE1P24864 410 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 GCKRQ14397 625 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 EFTUD2Q15029 972 aaKnown RBP eCLIP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CACYBPQ9HB71 228 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CCNFP41002 786 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CPA2P48052 419 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 GPR141Q7Z602 305 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 ANKRD2Q9GZV1 360 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 THRAP3Q9Y2W1 955 aaKnown RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 MFN2O95140 757 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 KIF11P52732 1056 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 CAV1Q03135 178 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 TRIP10Q15642 601 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 FAM89AQ96GI7 184 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 BHMT2Q9H2M3 363 aa3.94□□□□□ -1.78
ATXN3-248ENST00000558190 MAGED2Q9UNF1 606 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-248ENST00000558190 MAN1A1P33908 653 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RGS9BPQ6ZS82 235 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TRIM67Q6ZTA4 783 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 IQCKQ8N0W5 287 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 CTNNAL1Q9UBT7 734 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TMEM247A6NEH6 219 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TJP3O95049 919 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ATF3P18847 181 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KCNMA1Q12791 1236 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RAPH1Q70E73 1250 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RBM12Q9NTZ6 932 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 GGA2Q9UJY4 613 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 COPEO14579 308 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 FAM102BQ5T8I3 360 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 KRT73Q86Y46 540 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF786Q8N393 782 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TTC17Q96AE7 1141 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ZIM3Q96PE6 472 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 QKIQ96PU8 341 aaKnown RBP eCLIP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 DNM1LO00429 736 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 EZH2Q15910 746 aaKnown RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 EPC2Q52LR7 807 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 RHOT2Q8IXI1 618 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 SUPT20HQ8NEM7 779 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 DACH2Q96NX9 599 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 IGF1RP08069 1367 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MYCLP12524 364 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 TMED8Q6PL24 325 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-248ENST00000558190 PCGF5Q86SE9 256 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 MYCBPAPQ8TBZ2 947 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 PPP2R3CQ969Q6 453 aa3.93□□□□□ -1.78
ATXN3-248ENST00000558190 ITFG2Q969R8 447 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms