RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 YY1P25490 414 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 HOXD13P35453 343 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 TCF7P36402 384 aaPredicted RBP12.03□□□□□ -0.48
PABPN1-203ENST00000553960 PBX1P40424 430 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 FANCCQ00597 558 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 NR1I3Q14994 352 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 ARHGEF6Q15052 776 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 LY6KQ17RY6 165 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 HSDL1Q3SXM5 330 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 CYP4F22Q6NT55 531 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 SPATA33Q96N06 139 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 ZIC5Q96T25 663 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 NFKBIZQ9BYH8 718 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 AZI2Q9H6S1 392 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 BCAS3Q9H6U6 928 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 TMEM206Q9H813 350 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 TYW1Q9NV66 732 aaKnown RBP12.03□□□□□ -0.48
PABPN1-203ENST00000553960 DMAC2Q9NW81 257 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 ERAP1Q9NZ08 941 aa12.03□□□□□ -0.48
PABPN1-203ENST00000553960 A0A087WWV3 80 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 A0A1W2PQC6 194 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ZBTB42B2RXF5 422 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.49
PABPN1-203ENST00000553960 TNPO2O14787 897 aaKnown RBP12.02□□□□□ -0.49
PABPN1-203ENST00000553960 MAGEB2O15479 319 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 HIP1RO75146 1068 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 PIGRP01833 764 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.49
PABPN1-203ENST00000553960 HOXD10P28358 340 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ARL2P36404 184 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 CDC42EP1Q00587 391 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 SP3Q02447 781 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 PPP2R5AQ15172 486 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 XKR9Q5GH70 373 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 TCP11X2Q5H9J9 407 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 WDR78Q5VTH9 848 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ANKRD40Q6AI12 368 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ISM2Q6H9L7 571 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 SFR1Q86XK3 245 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
PABPN1-203ENST00000553960 FBXO16Q8IX29 292 aaPredicted RBP12.02□□□□□ -0.49
PABPN1-203ENST00000553960 LINC01465Q8N7H1 131 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ANKRD20A12PQ8NF67 263 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 PXYLP1Q8TE99 480 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 TRIM47Q96LD4 638 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 TSG101Q99816 390 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 C16orf70Q9BSU1 422 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 TRIM5Q9C035 493 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 UPF3AQ9H1J1 476 aaKnown RBP12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ATP6V0A4Q9HBG4 840 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 SLC39A2Q9NP94 309 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
PABPN1-203ENST00000553960 XPNPEP1Q9NQW7 623 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ARHGAP28Q9P2N2 729 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 ITIH6Q6UXX5 1313 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 SIP14410 1827 aa12.02□□□□□ -0.49
PABPN1-203ENST00000553960 NOP56O00567 594 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 BACH1O14867 736 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 KIAA0391O15091 583 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 PMM2O15305 246 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 SLC16A3O15427 465 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 ASAP2O43150 1006 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 DUSP11O75319 330 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 RPL13P26373 211 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 HOXC8P31273 242 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 NAMPTP43490 491 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 SMTNP53814 917 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 PMS1P54277 932 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 POU5F1Q01860 360 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 MXD4Q14582 209 aaPredicted RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 CCDC144BQ3MJ40 725 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 ODR4Q5SWX8 454 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 MAP3K21Q5TCX8 1036 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 IER5Q5VY09 327 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 FAM43BQ6ZT52 329 aaPredicted RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 FAM178BQ8IXR5 827 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 SMYD4Q8IYR2 804 aaPredicted RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 CSGALNACT2Q8N6G5 542 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 TCP11Q8WWU5 503 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 CEP170P1Q96L14 293 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 TMEM134Q9H6X4 195 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 PDGFCQ9NRA1 345 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 SAMSN1Q9NSI8 373 aaKnown RBP12.01□□□□□ -0.49
PABPN1-203ENST00000553960 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 TBC1D7Q9P0N9 293 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 FAM184BQ9ULE4 1060 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 STYXL1Q9Y6J8 313 aa12.01□□□□□ -0.49
PABPN1-203ENST00000553960 RRN3P2A6NIE6 340 aa12□□□□□ -0.49
PABPN1-203ENST00000553960 GOLGA6L6A8MZA4 724 aa12□□□□□ -0.49
PABPN1-203ENST00000553960 HAS3O00219 553 aa12□□□□□ -0.49
PABPN1-203ENST00000553960 F2P00734 622 aa12□□□□□ -0.49
PABPN1-203ENST00000553960 RPLP2P05387 115 aaKnown RBP12□□□□□ -0.49
PABPN1-203ENST00000553960 CYBAP13498 195 aa12□□□□□ -0.49
PABPN1-203ENST00000553960 ATP1A3P13637 1013 aa12□□□□□ -0.49
PABPN1-203ENST00000553960 SMPD1P17405 629 aa12□□□□□ -0.49
PABPN1-203ENST00000553960 CST5P28325 142 aaPredicted RBP12□□□□□ -0.49
PABPN1-203ENST00000553960 CTGFP29279 349 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms