RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-230ENST00000552960 NR2F2P24468 414 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 HIBCHQ6NVY1 386 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-230ENST00000552960 RPAINQ86UA6 219 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 U2AF1L4Q8WU68 220 aaKnown RBP13.45□□□□□ -0.26
HDAC7-230ENST00000552960 GGT7Q9UJ14 662 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 PNMA2Q9UL42 364 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 CLGNO14967 610 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 NEBLO76041 1014 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 IFNAR2P48551 515 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 MMP14P50281 582 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
HDAC7-230ENST00000552960 GPBP1Q86WP2 473 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
HDAC7-230ENST00000552960 RASSF9O75901 435 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 EZRP15311 586 aaKnown RBP13.44□□□□□ -0.26
HDAC7-230ENST00000552960 ADCY7P51828 1080 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 IKQ13123 557 aaPredicted RBP13.44□□□□□ -0.26
HDAC7-230ENST00000552960 CUL1Q13616 776 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 SEPT2Q15019 361 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 GJB7Q6PEY0 223 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 TAX1BP1Q86VP1 789 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 HVCN1Q96D96 273 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 EMILIN3Q9NT22 766 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 PCDHA12Q9UN75 941 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 CETN3O15182 167 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 FGGP02679 453 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 CLTAP09496 248 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 ECHS1P30084 290 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 ELF1P32519 619 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 SCTRP47872 440 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 USP11P51784 963 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 ANKRD20A8PQ5CZ79 823 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 EDEM3Q9BZQ6 932 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 SLC12A6Q9UHW9 1150 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
HDAC7-230ENST00000552960 UTP11Q9Y3A2 253 aaKnown RBP13.44□□□□□ -0.26
HDAC7-230ENST00000552960 RGPD3A6NKT7 1758 aaPredicted RBP13.44□□□□□ -0.26
HDAC7-230ENST00000552960 RGPD4Q7Z3J3 1758 aa13.44□□□□□ -0.26
HDAC7-230ENST00000552960 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 POTECB2RU33 542 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 RBAK-RBAKDNI3L0D1 243 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 SLCO1A2P46721 670 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 C6orf89Q6UWU4 347 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 CCDC65Q8IXS2 484 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 MTMR9Q96QG7 549 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.268e-7■■■■■ 32.7
HDAC7-230ENST00000552960 VEZTQ9HBM0 779 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 HDAC9Q9UKV0 1011 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 IGKV6D-41A0A0C4DH26 115 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 GBP2P32456 591 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 FAM133BQ5BKY9 247 aaKnown RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 CCDC26Q8TAB7 109 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 DDX25Q9UHL0 483 aaKnown RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 NAGPAQ9UK23 515 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 H0YGN5 161 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 MEIS1O00470 390 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 CAND2O75155 1236 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 SKAP2O75563 359 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 PLTPP55058 493 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 ZNF211Q13398 564 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 BIRC3Q13489 604 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 NAA25Q14CX7 972 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 LLGL1Q15334 1064 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 EXOC3L4Q17RC7 722 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 MIGA2Q7L4E1 593 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 TRIM59Q8IWR1 403 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 PBKQ96KB5 322 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 PSMD1Q99460 953 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 LZTS2Q9BRK4 669 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 ACTR5Q9H9F9 607 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-230ENST00000552960 NR2E1Q9Y466 385 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 NFS1Q9Y697 457 aa13.43□□□□□ -0.26
HDAC7-230ENST00000552960 PPP1R11O60927 126 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 EEF2P13639 858 aaKnown RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 KRT13P13646 458 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 UCHL3P15374 230 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 STAT3P40763 770 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 CLNS1AP54105 237 aaKnown RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 IFI16Q16666 785 aaKnown RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 NBPF9Q3BBW0 867 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 LRIG3Q6UXM1 1119 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 GLG1Q92896 1179 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 DNAJC19Q96DA6 116 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 SGSM3Q96HU1 749 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 LRRC27Q9C0I9 530 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 ARMCX3Q9UH62 379 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 ATXN2Q99700 1313 aaKnown RBP13.42□□□□□ -0.26
HDAC7-230ENST00000552960 SPDYE3A6NKU9 549 aa13.42□□□□□ -0.26
HDAC7-230ENST00000552960 CLIC2O15247 247 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms