RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PERM1Q5SV97 790 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 TMCO4Q5TGY1 634 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 GKAP1Q5VSY0 366 aaPredicted RBP5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 MSL1Q68DK7 614 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 IRGCQ6NXR0 463 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 WDR59Q6PJI9 974 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 LRRC43Q8N309 656 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 TTC16Q8NEE8 873 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 ATP8B4Q8TF62 1192 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 LTV1Q96GA3 475 aaPredicted RBP5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 PBKQ96KB5 322 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 GDAP1L1Q96MZ0 367 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 CTAGE1Q96RT6 745 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 IWS1Q96ST2 819 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM129AQ9BZQ8 928 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 IGFLR1Q9H665 355 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 CWC25Q9NXE8 425 aaPredicted RBP5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 HSFX1Q9UBD0 423 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 RNF14Q9UBS8 474 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 CEP131Q9UPN4 1083 aa5.8□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM208AQ9UK61 1670 aaKnown RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 LOC102724428A0A0B4J2F2 783 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 A0A1W2PQC6 194 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PHF20L1A8MW92 1017 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 BTBD19C9JJ37 291 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 E7EVH7 732 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 F8VZ95 297 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 EIF1AYO14602 144 aaKnown RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 KIF3BO15066 747 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 STRNO43815 780 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ECE2O60344 883 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SRGAP2O75044 1071 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SMIM24O75264 130 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ATP6V1G1O75348 118 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 LCA5LO95447 670 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 KRT14P02533 472 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SSBP05455 408 aaKnown RBP eCLIP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CYP21A2P08686 494 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM153BP0C7A2 387 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 UBTFL1P0CB47 393 aaPredicted RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CPB1P15086 417 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ACPPP15309 386 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CES1P23141 567 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ECHS1P30084 290 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 STAT6P42226 847 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PEX5P50542 639 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SCNN1BP51168 640 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SIK1P57059 783 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PPP2R2AP63151 447 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ZNF844Q08AG5 666 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 C2orf54Q08AI8 447 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 HYAL2Q12891 473 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 STK3Q13188 491 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 UAP1Q16222 522 aaPredicted RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 GRIK5Q16478 980 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PCSK7Q16549 785 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CLPPQ16740 277 aaPredicted RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PARP6Q2NL67 630 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM153CQ494X1 144 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SPDYCQ5MJ68 293 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PEAR1Q5VY43 1037 aaPredicted RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TBC1D9BQ66K14 1250 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TMEM132EQ6IEE7 984 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CCDC70Q6NSX1 233 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 KANK3Q6NY19 840 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 HFE2Q6ZVN8 426 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ZNF589Q86UQ0 364 aaPredicted RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM35AQ86V20 835 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 EXOC3L1Q86VI1 746 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ZSCAN29Q8IWY8 852 aaPredicted RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 IFT20Q8IY31 132 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SPICE1Q8N0Z3 855 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 GBP7Q8N8V2 638 aaPredicted RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CCDC197Q8NCU1 140 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PHC3Q8NDX5 983 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 STKLD1Q8NE28 680 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 ZNF507Q8TCN5 953 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PTPRN2Q92932 1015 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 PPP2R3CQ969Q6 453 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 OPTNQ96CV9 577 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CCDC43Q96MW1 224 aaKnown RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 XPO6Q96QU8 1125 aaKnown RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SEC62Q99442 399 aaKnown RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CHP1Q99653 195 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TXLNGYQ9BZA5 131 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TRIM4Q9C037 500 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TTYH3Q9C0H2 523 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 BRD8Q9H0E9 1235 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SIL1Q9H173 461 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 CNOT10Q9H9A5 744 aaKnown RBP5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SEC31BQ9NQW1 1179 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 MIS18AQ9NYP9 233 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 FRRS1LQ9P0K9 344 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TRIM10Q9UDY6 481 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TUBGCP4Q9UGJ1 667 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 FAM153AQ9UHL3 310 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 TMEM59LQ9UK28 342 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 AMOTL2Q9Y2J4 779 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 POGZQ7Z3K3 1410 aa5.79□□□□□ -1.48
LSM3P2-201ENST00000551246 SPATA31D1Q6ZQQ2 1576 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms