RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 CMA1P23946 247 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 CDC42EP1Q00587 391 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 RBL2Q08999 1139 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 RESP18Q5W5W9 173 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 SHC4Q6S5L8 630 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 TCP11Q8WWU5 503 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 SH2D3AQ9BRG2 576 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 BHMT2Q9H2M3 363 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 DHX33Q9H6R0 707 aaKnown RBP23.88■■□□□ 1.41
NEK3-202ENST00000550841 GDPD2Q9HCC8 539 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 STK17AQ9UEE5 414 aa23.88■■□□□ 1.41
NEK3-202ENST00000550841 ALPK3Q96L96 1907 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 IGKV6-21A0A0C4DH24 114 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 A0A1W2PQ27 194 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 A0A1W2PQ64 194 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 A0A1W2PQD8 194 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 E9PMD0 336 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 TIMP1P01033 207 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 PLCG1P19174 1290 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 THPOP40225 353 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 IER5Q5VY09 327 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 RUFY4Q6ZNE9 571 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 DNAJB3Q8WWF6 145 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 MAP7D2Q96T17 732 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 NOC4LQ9BVI4 516 aaKnown RBP23.87■■□□□ 1.41
NEK3-202ENST00000550841 ATP6V0A4Q9HBG4 840 aa23.87■■□□□ 1.41
NEK3-202ENST00000550841 TRIM43BA6NCK2 446 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 M0QZ92 97 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 PARNO95453 639 aaKnown RBP23.86■■□□□ 1.41
NEK3-202ENST00000550841 PADI6Q6TGC4 694 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 SH3RF1Q7Z6J0 888 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 KIAA0319LQ8IZA0 1049 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 SYT2Q8N9I0 419 aaPredicted RBP23.86■■□□□ 1.41
NEK3-202ENST00000550841 MCPH1Q8NEM0 835 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 DHX38Q92620 1227 aaKnown RBP23.86■■□□□ 1.41
NEK3-202ENST00000550841 TRIM43Q96BQ3 446 aaPredicted RBP23.86■■□□□ 1.41
NEK3-202ENST00000550841 MTRQ99707 1265 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 FAM49AQ9H0Q0 323 aaPredicted RBP23.86■■□□□ 1.41
NEK3-202ENST00000550841 ZMYND8Q9ULU4 1186 aaPredicted RBP23.86■■□□□ 1.41
NEK3-202ENST00000550841 LOXHD1Q8IVV2 1947 aa23.86■■□□□ 1.41
NEK3-202ENST00000550841 EVPLQ92817 2033 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 PLA2G4BP0C869 781 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 CKBP12277 381 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 EMC2Q15006 297 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 TRIM71Q2Q1W2 868 aaKnown RBP23.85■■□□□ 1.41
NEK3-202ENST00000550841 CLEC17AQ6ZS10 378 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 IQUBQ8NA54 791 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 RAD54LQ92698 747 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 PANK2Q9BZ23 570 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 CUEDC2Q9H467 287 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 KCND2Q9NZV8 630 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 CEP290O15078 2479 aa23.85■■□□□ 1.41
NEK3-202ENST00000550841 ASAP2O43150 1006 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 SSBP05455 408 aaKnown RBP eCLIP23.84■■□□□ 1.41
NEK3-202ENST00000550841 SELPP16109 830 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 CYP11B2P19099 503 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 STAT6P42226 847 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 KCNK18Q7Z418 384 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 LRRC71Q8N4P6 559 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 TMEM199Q8N511 208 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 LINC01465Q8N7H1 131 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 ZBTB10Q96DT7 871 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 TIPINQ9BVW5 301 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 PPP1R12CQ9BZL4 782 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 KCNH3Q9ULD8 1083 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 AKT3Q9Y243 479 aa23.84■■□□□ 1.41
NEK3-202ENST00000550841 TRIOBPQ9H2D6 2365 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 USO1O60763 962 aaKnown RBP23.83■■□□□ 1.41
NEK3-202ENST00000550841 BMP8BP34820 402 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 CLCN3P51790 818 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 FAM26DQ5JW98 314 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 PDILTQ8N807 584 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 PSPC1Q8WXF1 523 aaKnown RBP23.83■■□□□ 1.41
NEK3-202ENST00000550841 LARP4BQ92615 738 aaKnown RBP23.83■■□□□ 1.41
NEK3-202ENST00000550841 WNT8BQ93098 351 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 GBP4Q96PP9 640 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 GDF15Q99988 308 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 LBHD1Q9BQE6 289 aaPredicted RBP23.83■■□□□ 1.41
NEK3-202ENST00000550841 BLOC1S4Q9NUP1 217 aa23.83■■□□□ 1.41
NEK3-202ENST00000550841 SUCLA2Q9P2R7 463 aaPredicted RBP23.83■■□□□ 1.41
NEK3-202ENST00000550841 RSPH10B2B2RC85 870 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 IQCF3P0C7M6 154 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 RSPH10BP0C881 870 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 SYN1P17600 705 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 CYP2C18P33260 490 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 SLC12A3P55017 1021 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 MRPS6P82932 125 aaKnown RBP23.82■■□□□ 1.4
NEK3-202ENST00000550841 MXD4Q14582 209 aaPredicted RBP23.82■■□□□ 1.4
NEK3-202ENST00000550841 ZNF618Q5T7W0 954 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 MFSD5Q6N075 450 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 RINT1Q6NUQ1 792 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 SV2BQ7L1I2 683 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 LRRC8DQ7L1W4 858 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 MRPS27Q92552 414 aaKnown RBP23.82■■□□□ 1.4
NEK3-202ENST00000550841 LRRC27Q9C0I9 530 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 USP25Q9UHP3 1055 aa23.82■■□□□ 1.4
NEK3-202ENST00000550841 POLR2DO15514 142 aaKnown RBP23.81■■□□□ 1.4
NEK3-202ENST00000550841 RFC2P35250 354 aa23.81■■□□□ 1.4
NEK3-202ENST00000550841 MCM6Q14566 821 aa23.81■■□□□ 1.4
NEK3-202ENST00000550841 C1orf186Q6ZWK4 172 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms