RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 FCGRTP55899 365 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 KIF23Q02241 960 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 KCNJ12Q14500 433 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 CCDC81Q6ZN84 652 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 MMS22LQ6ZRQ5 1243 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ZNF444Q8N0Y2 327 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 MEIOBQ8N635 442 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 OSBPL5Q9H0X9 879 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 SAMD15Q9P1V8 674 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 MAN1B1Q9UKM7 699 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 A0A1W2PRG0 241 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 NEURL1BA8MQ27 555 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 GCOM1H8Y6P7 765 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 M0R2C6 588 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 TBC1D8O95759 1140 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 PCCAP05165 728 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 MYZAPP0CAP1 466 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 CHRNA5P30532 468 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ST13P50502 369 aaKnown RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ADCY1Q08828 1119 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 LRCH2Q5VUJ6 765 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 MCTP2Q6DN12 878 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ATG9AQ7Z3C6 839 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 FAM114A1Q8IWE2 563 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 IFT20Q8IY31 132 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 APPBP2Q92624 585 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ZIC5Q96T25 663 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 UBXN6Q9BZV1 441 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 KRT23Q9C075 422 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 DPH5Q9H2P9 285 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 VEZTQ9HBM0 779 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 CPSF2Q9P2I0 782 aaKnown RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 SEC63Q9UGP8 760 aaKnown RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 FAM221BA6H8Z2 402 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 METTL12A8MUP2 240 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 IKBKBO14920 756 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ZRANB2O95218 330 aaKnown RBP eCLIP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 SLC5A1P13866 664 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 TARSP26639 723 aaKnown RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ADORA1P30542 326 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 GJC1P36383 396 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 PDE4BQ07343 736 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 SCARF1Q14162 830 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 SPATA1Q5VX52 437 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 CDAN1Q8IWY9 1227 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 CCDC155Q8N6L0 562 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ZBTB38Q8NAP3 1195 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 HNRNPLLQ8WVV9 542 aaKnown RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 HPS1Q92902 700 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 MASTLQ96GX5 879 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 AGXT2Q9BYV1 514 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 KAT14Q9H8E8 782 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 MRPL44Q9H9J2 332 aaKnown RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 EPB41L5Q9HCM4 733 aa6.01□□□□□ -1.45
LIMA1-203ENST00000547825 ABI2Q9NYB9 513 aaPredicted RBP6.01□□□□□ -1.45
LIMA1-203ENST00000547825 BAZ2BQ9UIF8 2168 aaKnown RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 NPR1P16066 1061 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 CTNNA1P35221 906 aaKnown RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 ANTXR2P58335 489 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 AMPD3Q01432 767 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 GRIN1Q05586 938 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 SERINC3Q13530 473 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 MORC3Q14149 939 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 TTC38Q5R3I4 469 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 C15orf52Q6ZUT6 534 aaKnown RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 DAAM2Q86T65 1068 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 KIAA0825Q8IV33 1275 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 KIRREL3Q8IZU9 778 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 SYNE4Q8N205 404 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 SH2D3CQ8N5H7 860 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 NOA1Q8NC60 698 aaKnown RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 OSBP2Q969R2 916 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 SELENOOQ9BVL4 669 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 L2HGDHQ9H9P8 463 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 PCDHB6Q9Y5E3 794 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 CCDC160A6NGH7 325 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 B4DLN1 442 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 SMIM22K7EJ46 135 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 MPHOSPH10O00566 681 aaKnown RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 CLGNO14967 610 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 TNNC1P63316 161 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 PPARAQ07869 468 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 HIBCHQ6NVY1 386 aaPredicted RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 NELFCDQ8IXH7 590 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 KRT12Q99456 494 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 TRIM10Q9UDY6 481 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 HCN2Q9UL51 889 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 CEP350Q5VT06 3117 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 ZNF532Q9HCE3 1301 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 H3BQF6 201 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 KCNK3O14649 394 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 DEXIO95424 95 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 CELA3AP09093 270 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 CES1P23141 567 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 COPB1P53618 953 aaKnown RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 RASSF7Q02833 373 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 DCAF17Q5H9S7 520 aaPredicted RBP6□□□□□ -1.45
LIMA1-203ENST00000547825 GALNT12Q8IXK2 581 aa6□□□□□ -1.45
LIMA1-203ENST00000547825 ANKRD42Q8N9B4 389 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms