RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DDX41Q9UJV9 622 aaKnown RBP10.28□□□□□ -0.76
GNE-206ENST00000543356 TELO2Q9Y4R8 837 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.28□□□□□ -0.76
GNE-206ENST00000543356 MAFBQ9Y5Q3 323 aaPredicted RBP10.28□□□□□ -0.76
GNE-206ENST00000543356 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 PRPF6O94906 941 aaKnown RBP10.28□□□□□ -0.76
GNE-206ENST00000543356 SKILP12757 684 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 PLS3P13797 630 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 ZNF157P51786 506 aaPredicted RBP10.28□□□□□ -0.76
GNE-206ENST00000543356 MAN2A1Q16706 1144 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 XKR3Q5GH77 459 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 MIIPQ5JXC2 388 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 CREBRFQ8IUR6 639 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 SLC17A8Q8NDX2 589 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 NOC4LQ9BVI4 516 aaKnown RBP10.28□□□□□ -0.76
GNE-206ENST00000543356 TMX1Q9H3N1 280 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 ST6GALNAC4Q9H4F1 302 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 ZNF302Q9NR11 478 aa10.28□□□□□ -0.76
GNE-206ENST00000543356 TMEM150BA6NC51 233 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 GGPS1O95749 300 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 ADORA2AP29274 412 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 NMT1P30419 496 aaKnown RBP10.27□□□□□ -0.76
GNE-206ENST00000543356 MAPK4P31152 587 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 SP4Q02446 784 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 GRB14Q14449 540 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 VWA3BQ502W6 1294 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 RGMBQ6NW40 437 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 SAPCD2Q86UD0 394 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 PPFIBP1Q86W92 1011 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 TC2NQ8N9U0 490 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 AFAP1L1Q8TED9 768 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 PCDHB13Q9Y5F0 798 aa10.27□□□□□ -0.76
GNE-206ENST00000543356 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 AKR1B15C9JRZ8 316 aaPredicted RBP10.27□□□□□ -0.77
GNE-206ENST00000543356 CETN3O15182 167 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 SLC16A3O15427 465 aaKnown RBP10.27□□□□□ -0.77
GNE-206ENST00000543356 DGAT1O75907 488 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 ARIH2O95376 493 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 OATP04181 439 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 SLC10A3P09131 477 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 TPM1P09493 284 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 NPEPPSP55786 919 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 FAM160B1Q5W0V3 765 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 CCDC62Q6P9F0 684 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 GPR142Q7Z601 462 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 CCDC51Q96ER9 411 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 CEP170P1Q96L14 293 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 PANX2Q96RD6 677 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 ERGIC2Q96RQ1 377 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 POLD4Q9HCU8 107 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 VTA1Q9NP79 307 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 KCND1Q9NSA2 647 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
GNE-206ENST00000543356 DIS3Q9Y2L1 958 aaKnown RBP10.27□□□□□ -0.77
GNE-206ENST00000543356 IVNS1ABPQ9Y6Y0 642 aa10.27□□□□□ -0.77
GNE-206ENST00000543356 SORBS3O60504 671 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 MFAP3LO75121 409 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 GYPCP04921 128 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 NR2F2P24468 414 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 RPL13P26373 211 aaKnown RBP10.26□□□□□ -0.77
GNE-206ENST00000543356 NCKAP1LP55160 1127 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 RTP1P59025 263 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 ADAM9Q13443 819 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 NOLC1Q14978 699 aaKnown RBP eCLIP10.26□□□□□ -0.77
GNE-206ENST00000543356 CELF3Q5SZQ8 465 aaKnown RBP10.26□□□□□ -0.77
GNE-206ENST00000543356 FKBP15Q5T1M5 1219 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 ARMCX2Q7L311 632 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 CNGA4Q8IV77 575 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 FBXO16Q8IX29 292 aaPredicted RBP10.26□□□□□ -0.77
GNE-206ENST00000543356 MCPH1Q8NEM0 835 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 GOLGA5Q8TBA6 731 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 KIFAP3Q92845 792 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 IQCDQ96DY2 449 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 EEF2KMTQ96G04 330 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 C17orf75Q9HAS0 396 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 PDLIM7Q9NR12 457 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 CYP26B1Q9NR63 512 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 MYH9P35579 1960 aaKnown RBP10.26□□□□□ -0.77
GNE-206ENST00000543356 K7ENM7 598 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 IGF2BP3O00425 579 aaKnown RBP eCLIP10.26□□□□□ -0.77
GNE-206ENST00000543356 TGFB1I1O43294 461 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 NR3C1P04150 777 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 RBL2Q08999 1139 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 TTLL4Q14679 1199 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 LY6KQ17RY6 165 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 CCDC40Q4G0X9 1142 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 ZC2HC1CQ53FD0 456 aaPredicted RBP10.26□□□□□ -0.77
GNE-206ENST00000543356 CEP135Q66GS9 1140 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 MAMDC4Q6UXC1 1216 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 EEPD1Q7L9B9 569 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 PLEKHH3Q7Z736 793 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 TMEM139Q8IV31 216 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 TRIM59Q8IWR1 403 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 SCFD2Q8WU76 684 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 TMEM174Q8WUU8 243 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 SEPT1Q8WYJ6 367 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 HVCN1Q96D96 273 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 PCYT2Q99447 389 aa10.26□□□□□ -0.77
GNE-206ENST00000543356 NIFKQ9BYG3 293 aaKnown RBP10.26□□□□□ -0.77
GNE-206ENST00000543356 NDST4Q9H3R1 872 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms