RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CAPN7Q9Y6W3 813 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 EBAG9O00559 213 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 TSPY3P0CV98 308 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 TSPY8P0CW00 308 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 GUCY1A2P33402 732 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 MAN1A1P33908 653 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 ME1P48163 572 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 PLCD1P51178 756 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 TROAPQ12815 778 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 MAP7Q14244 749 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 STK38Q15208 465 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 CCDC144BQ3MJ40 725 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.71□□□□□ -0.21
DDX55-206ENST00000539934 SLC17A8Q8NDX2 589 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 ZFPM2Q8WW38 1151 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 USP6NLQ92738 828 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 TMEM39BQ9GZU3 492 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 CEP131Q9UPN4 1083 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 DNAH12Q6ZR08 3092 aa13.71□□□□□ -0.21
DDX55-206ENST00000539934 PALM3A6NDB9 673 aaPredicted RBP13.71□□□□□ -0.22
DDX55-206ENST00000539934 TMEM247A6NEH6 219 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 SKIP12755 728 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 GNAQP50148 359 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 CACNB3P54284 484 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 SAFBQ15424 915 aaKnown RBP eCLIP13.71□□□□□ -0.22
DDX55-206ENST00000539934 POTEEQ6S8J3 1075 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.22
DDX55-206ENST00000539934 KCND1Q9NSA2 647 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.22
DDX55-206ENST00000539934 CIDEBQ9UHD4 219 aa13.71□□□□□ -0.22
DDX55-206ENST00000539934 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.22
DDX55-206ENST00000539934 RASSF9O75901 435 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 ZBTB17Q13105 803 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 VGLL4Q14135 290 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 SNCBQ16143 134 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 SLC44A5Q8NCS7 719 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 ATRIPQ8WXE1 791 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 SPAG5Q96R06 1193 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 CTAGE1Q96RT6 745 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 KAT14Q9H8E8 782 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 CLIC4Q9Y696 253 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 OTOFQ9HC10 1997 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 TTC34A8MYJ7 566 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 H3BQF6 201 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 AKR1B10O60218 316 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
DDX55-206ENST00000539934 TUBB4AP04350 444 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 CD53P19397 219 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 CDK17Q00537 523 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 PICALMQ13492 652 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 ANKRD49Q8WVL7 239 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 UROC1Q96N76 676 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 AASDHPPTQ9NRN7 309 aa13.7□□□□□ -0.22
DDX55-206ENST00000539934 MYH8P13535 1937 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 A6NHS1 94 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 MAP2K7O14733 419 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 NR1I2O75469 434 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 PLEKHA8P1O95397 391 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 YEATS4O95619 227 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 PSMC4P43686 418 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 CAMK4Q16566 473 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
DDX55-206ENST00000539934 ARL6IP6Q8N6S5 226 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 LINC00301Q8NCQ3 95 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 TRPC4APQ8TEL6 797 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 BHMT2Q9H2M3 363 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 ZFYVE28Q9HCC9 887 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 VPS18Q9P253 973 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 MYO1AQ9UBC5 1043 aa13.69□□□□□ -0.22
DDX55-206ENST00000539934 MMP1P03956 469 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 CTGFP29279 349 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 PMS2P54278 862 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 BEND6Q5SZJ8 279 aaPredicted RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 ANO1Q5XXA6 986 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 KIRREL3Q8IZU9 778 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 LILRB1Q8NHL6 650 aaPredicted RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.68□□□□□ -0.22
DDX55-206ENST00000539934 ATP6V0A1Q93050 837 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 SHISA4Q96DD7 197 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 KCNJ14Q9UNX9 436 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 EFR3BQ9Y2G0 817 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 MYPNQ86TC9 1320 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 ABLIM1O14639 778 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 PRPF3O43395 683 aaKnown RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 KIF5BP33176 963 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 CDK8P49336 464 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 C16orf86Q6ZW13 317 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 TMTC3Q6ZXV5 915 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 PPFIBP1Q86W92 1011 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 LURAP1LQ8IV03 231 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 DIS3L2Q8IYB7 885 aaKnown RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 TMCO5AQ8N6Q1 288 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms