RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SPATA4Q8NEY3 305 aa19.61■□□□□ 0.73
GNE-204ENST00000539208 JDP2Q8WYK2 163 aa19.61■□□□□ 0.73
GNE-204ENST00000539208 ZFP91Q96JP5 570 aaPredicted RBP19.61■□□□□ 0.73
GNE-204ENST00000539208 DBR1Q9UK59 544 aaKnown RBP19.61■□□□□ 0.73
GNE-204ENST00000539208 MYH10P35580 1976 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 BUB1O43683 1085 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 PPP1R37O75864 691 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 MAPTP10636 758 aaKnown RBP19.6■□□□□ 0.73
GNE-204ENST00000539208 RPS12P25398 132 aaKnown RBP19.6■□□□□ 0.73
GNE-204ENST00000539208 KLRC1P26715 233 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 MAPK7Q13164 816 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 KIAA0753Q2KHM9 967 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 TKFCQ3LXA3 575 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 ZNF571Q7Z3V5 609 aaPredicted RBP19.6■□□□□ 0.73
GNE-204ENST00000539208 BANK1Q8NDB2 785 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 TMEM174Q8WUU8 243 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 SUGCTQ9HAC7 445 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 AGPAT3Q9NRZ7 376 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 GCNT4Q9P109 453 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 LYPLA2O95372 231 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 NAP1L1P55209 391 aaKnown RBP19.6■□□□□ 0.73
GNE-204ENST00000539208 C2orf54Q08AI8 447 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 PPP2R5AQ15172 486 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 RBM46Q8TBY0 533 aaKnown RBP19.6■□□□□ 0.73
GNE-204ENST00000539208 AGO4Q9HCK5 861 aaKnown RBP19.6■□□□□ 0.73
GNE-204ENST00000539208 DAAM1Q9Y4D1 1078 aa19.6■□□□□ 0.73
GNE-204ENST00000539208 POLR3GO15318 223 aaPredicted RBP19.59■□□□□ 0.73
GNE-204ENST00000539208 PAFAH1B1P43034 410 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 ALCAMQ13740 583 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 CCNI2Q6ZMN8 369 aaPredicted RBP19.59■□□□□ 0.73
GNE-204ENST00000539208 DAW1Q8N136 415 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 SYTL5Q8TDW5 730 aaPredicted RBP19.59■□□□□ 0.73
GNE-204ENST00000539208 TAOK3Q9H2K8 898 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 ACBD3Q9H3P7 528 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 NENFQ9UMX5 172 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 FRMD4BQ9Y2L6 1034 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 FER1L6Q2WGJ9 1857 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 H3BQF6 201 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 HIP1RO75146 1068 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 PALMO75781 387 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 CCDC181Q5TID7 509 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 PADI6Q6TGC4 694 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 IL31RAQ8NI17 732 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 PDE11AQ9HCR9 933 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 TBC1D22BQ9NU19 505 aa19.59■□□□□ 0.73
GNE-204ENST00000539208 NCK2O43639 380 aa19.58■□□□□ 0.72
GNE-204ENST00000539208 FDX1P10109 184 aa19.58■□□□□ 0.72
GNE-204ENST00000539208 MRPS9P82933 396 aaKnown RBP19.58■□□□□ 0.72
GNE-204ENST00000539208 ITGB3BPQ13352 177 aaPredicted RBP19.58■□□□□ 0.72
GNE-204ENST00000539208 SF3B2Q13435 895 aaKnown RBP19.58■□□□□ 0.72
GNE-204ENST00000539208 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
GNE-204ENST00000539208 MEI1Q5TIA1 1274 aa19.58■□□□□ 0.72
GNE-204ENST00000539208 ZCCHC17Q9NP64 241 aaKnown RBP19.58■□□□□ 0.72
GNE-204ENST00000539208 NAGPAQ9UK23 515 aa19.58■□□□□ 0.72
GNE-204ENST00000539208 PPP1R9AQ9ULJ8 1098 aa19.58■□□□□ 0.72
GNE-204ENST00000539208 FLOT1O75955 427 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 GFPT2O94808 682 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 ALAS1P13196 640 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 FERP16591 822 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 FMO5P49326 533 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 COG2Q14746 738 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 CFAP221Q4G0U5 840 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 PACSIN1Q9BY11 444 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 IKZF4Q9H2S9 585 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 RNF216Q9NWF9 866 aaPredicted RBP19.57■□□□□ 0.72
GNE-204ENST00000539208 ZHX2Q9Y6X8 837 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 VPS36Q86VN1 386 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 KSR1Q8IVT5 923 aa19.57■□□□□ 0.72
GNE-204ENST00000539208 RAVER2Q9HCJ3 691 aaKnown RBP19.57■□□□□ 0.72
GNE-204ENST00000539208 LARSQ9P2J5 1176 aaKnown RBP19.57■□□□□ 0.72
GNE-204ENST00000539208 LRRIQ3A6PVS8 624 aaPredicted RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 DDX39AO00148 427 aaKnown RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 CXCR5P32302 372 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 STAT1P42224 750 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 QARSP47897 775 aaKnown RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 MTMR1Q13613 665 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 ENOX2Q16206 610 aaKnown RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 IFI16Q16666 785 aaKnown RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 GLE1Q53GS7 698 aaKnown RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 MUM1L1Q5H9M0 696 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 FMNL3Q8IVF7 1028 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 CPXCR1Q8N123 301 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 TIPINQ9BVW5 301 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 TMEM206Q9H813 350 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 AJAP1Q9UKB5 411 aaPredicted RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 INTUQ9ULD6 942 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 MYH11P35749 1972 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 GRID2IPA4D2P6 1211 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 CES2O00748 559 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 CYP2C19P33261 490 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 ALKBH5Q6P6C2 394 aaKnown RBP19.56■□□□□ 0.72
GNE-204ENST00000539208 STK33Q9BYT3 514 aa19.56■□□□□ 0.72
GNE-204ENST00000539208 ZBED4O75132 1171 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 VCAM1P19320 739 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 AARSP49588 968 aaKnown RBP eCLIP19.55■□□□□ 0.72
GNE-204ENST00000539208 RARRES1P49788 294 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 PGM5Q15124 567 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 DEFB132Q7Z7B7 95 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 C12orf56Q8IXR9 622 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 SYCP3Q8IZU3 236 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms