RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ADSSL1Q8N142 457 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 MXRA8Q9BRK3 442 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 APOL5Q9BWW9 433 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 SPG21Q9NZD8 308 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 HCSTQ9UBK5 93 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 PCDHA6Q9UN73 950 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 GINS2Q9Y248 185 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 PCDHA8Q9Y5H6 950 aa14.18□□□□□ -0.14
CAPN1-223ENST00000533079 E7EWF7 191 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 KLRC1P26715 233 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 NUCB1Q02818 461 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 ZNF484Q5JVG2 852 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 FAM228AQ86W67 206 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 KIAA0319LQ8IZA0 1049 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 MRPL43Q8N983 215 aaKnown RBP14.17□□□□□ -0.14
CAPN1-223ENST00000533079 IGDCC4Q8TDY8 1250 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 CASD1Q96PB1 797 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 MRPL9Q9BYD2 267 aaKnown RBP14.17□□□□□ -0.14
CAPN1-223ENST00000533079 IL25Q9H293 177 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 SEMA4AQ9H3S1 761 aa14.17□□□□□ -0.14
CAPN1-223ENST00000533079 C2orf71A6NGG8 1288 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 CALM1P0DP23 149 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 CALM2P0DP24 149 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 CALM3P0DP25 149 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 AOC1P19801 751 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 GIT2Q14161 759 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 DSC3Q14574 896 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 UBE2SQ16763 222 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 CWF19L1Q69YN2 538 aaKnown RBP14.16□□□□□ -0.14
CAPN1-223ENST00000533079 CCDC105Q8IYK2 499 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 RUFY2Q8WXA3 655 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 RTP3Q9BQQ7 232 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 RWDD1Q9H446 243 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-223ENST00000533079 LY9Q9HBG7 655 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 DNAH14Q0VDD8 3507 aa14.16□□□□□ -0.14
CAPN1-223ENST00000533079 SPTBN4Q9H254 2564 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 BAZ2BQ9UIF8 2168 aaKnown RBP14.15□□□□□ -0.14
CAPN1-223ENST00000533079 EOMESO95936 686 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 ANTXR2P58335 489 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 KIZQ2M2Z5 673 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 CEP55Q53EZ4 464 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 PPP1R18Q6NYC8 613 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 CENPQQ7L2Z9 268 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-223ENST00000533079 MB21D2Q8IYB1 491 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-223ENST00000533079 SLC39A11Q8N1S5 342 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 TMTC2Q8N394 836 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 ACSF2Q96CM8 615 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-223ENST00000533079 OSMRQ99650 979 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 CDHR5Q9HBB8 845 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 AGO4Q9HCK5 861 aaKnown RBP14.15□□□□□ -0.14
CAPN1-223ENST00000533079 DBR1Q9UK59 544 aaKnown RBP14.15□□□□□ -0.14
CAPN1-223ENST00000533079 CEP131Q9UPN4 1083 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 IRAK3Q9Y616 596 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 CACNA1AO00555 2505 aa14.15□□□□□ -0.14
CAPN1-223ENST00000533079 DMXL1Q9Y485 3027 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 BACH1O14867 736 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 CLASP2O75122 1294 aaKnown RBP14.14□□□□□ -0.15
CAPN1-223ENST00000533079 GPR32O75388 356 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 PLEKHA8P1O95397 391 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 C22orf31O95567 290 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 FOSP01100 380 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-223ENST00000533079 ASGR2P07307 311 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 ZSCAN20P17040 1043 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-223ENST00000533079 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-223ENST00000533079 ATAT1Q5SQI0 421 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 CASC1Q6TDU7 716 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 ABHD15Q6UXT9 468 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 NIPA1Q7RTP0 329 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 SRBD1Q8N5C6 995 aaKnown RBP14.14□□□□□ -0.15
CAPN1-223ENST00000533079 BBXQ8WY36 941 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-223ENST00000533079 MYL10Q9BUA6 226 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 SMOC2Q9H3U7 446 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 ZNF302Q9NR11 478 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 CYP26B1Q9NR63 512 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 RNF19AQ9NV58 838 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 STK39Q9UEW8 545 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 CDH22Q9UJ99 828 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 DUSP12Q9UNI6 340 aa14.14□□□□□ -0.15
CAPN1-223ENST00000533079 CCDC69A6NI79 296 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 ZBTB42B2RXF5 422 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 PBX3P40426 434 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 ALDH7A1P49419 539 aaKnown RBP14.13□□□□□ -0.15
CAPN1-223ENST00000533079 POLGP54098 1239 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-223ENST00000533079 AP3B2Q13367 1082 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 ANGPT1Q15389 498 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 RARS2Q5T160 578 aaKnown RBP14.13□□□□□ -0.15
CAPN1-223ENST00000533079 MIS18BP1Q6P0N0 1132 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 PDXDC2PQ6P474 469 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 CCDC149Q6ZUS6 474 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 PPFIBP1Q86W92 1011 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 ECHDC2Q86YB7 292 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 CCDC60Q8IWA6 550 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-223ENST00000533079 FLCNQ8NFG4 579 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 TMEM169Q96HH4 297 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 TMEM87BQ96K49 555 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 ZBP1Q9H171 429 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 SFXN1Q9H9B4 322 aa14.13□□□□□ -0.15
CAPN1-223ENST00000533079 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms