RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 MAP7D2Q96T17 732 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 HSD17B14Q9BPX1 270 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 LXNQ9BS40 222 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 ZSWIM4Q9H7M6 989 aa18.37■□□□□ 0.53
PABPC1-221ENST00000522720 NOL7Q9UMY1 257 aaKnown RBP18.37■□□□□ 0.53
PABPC1-221ENST00000522720 CHD7Q9P2D1 2997 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 IGKV6-21A0A0C4DH24 114 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 SLITRK3O94933 977 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 PAK2Q13177 524 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 CTTNQ14247 550 aaKnown RBP18.36■□□□□ 0.53
PABPC1-221ENST00000522720 FAM117BQ6P1L5 589 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 TMEM40Q8WWA1 233 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 MYLIPQ8WY64 445 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 EIF2AK1Q9BQI3 630 aaKnown RBP18.36■□□□□ 0.53
PABPC1-221ENST00000522720 SH2D3AQ9BRG2 576 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 FTHL17Q9BXU8 183 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 CYP26B1Q9NR63 512 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 AKT3Q9Y243 479 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 INSL6Q9Y581 213 aa18.36■□□□□ 0.53
PABPC1-221ENST00000522720 H3BQV1 296 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 RPS6KA5O75582 802 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 TOB1P50616 345 aaPredicted RBP18.35■□□□□ 0.53
PABPC1-221ENST00000522720 NPEPPSP55786 919 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 NLRP11P59045 1033 aaKnown RBP18.35■□□□□ 0.53
PABPC1-221ENST00000522720 HTRA4P83105 476 aaPredicted RBP18.35■□□□□ 0.53
PABPC1-221ENST00000522720 CYP4A11Q02928 519 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 TAP1Q03518 808 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 PLA2G4FQ68DD2 849 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 TPH2Q8IWU9 490 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 NEK9Q8TD19 979 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 OSMRQ99650 979 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 ADAMTS10Q9H324 1103 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 PRDM12Q9H4Q4 367 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 ERVK-5Q9HDB9 667 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 NOC2LQ9Y3T9 749 aaKnown RBP18.35■□□□□ 0.53
PABPC1-221ENST00000522720 PPME1Q9Y570 386 aa18.35■□□□□ 0.53
PABPC1-221ENST00000522720 LCHNA4D1U4 455 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 GPR182O15218 404 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 MAFO75444 373 aaPredicted RBP18.34■□□□□ 0.53
PABPC1-221ENST00000522720 ARHGEF15O94989 841 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 UPP2O95045 317 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 LYPLA2O95372 231 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 OR52Z1P0C646 297 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 YWHABP31946 246 aaKnown RBP18.34■□□□□ 0.53
PABPC1-221ENST00000522720 DNM2P50570 870 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 CDC42EP1Q00587 391 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 NFX1Q12986 1120 aaKnown RBP18.34■□□□□ 0.53
PABPC1-221ENST00000522720 DRP2Q13474 957 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 TMEM266Q2M3C6 531 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 ODR4Q5SWX8 454 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 OTUD6AQ7L8S5 288 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 RTN4RL1Q86UN2 441 aaPredicted RBP18.34■□□□□ 0.53
PABPC1-221ENST00000522720 C4orf32Q8N8J7 132 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 ZNF579Q8NAF0 562 aaKnown RBP18.34■□□□□ 0.53
PABPC1-221ENST00000522720 CEP170P1Q96L14 293 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 PPP1R16BQ96T49 567 aa18.34■□□□□ 0.53
PABPC1-221ENST00000522720 JPH2Q9BR39 696 aaPredicted RBP18.34■□□□□ 0.53
PABPC1-221ENST00000522720 POTEMA6NI47 508 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 FOSL2P15408 326 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 TECP42680 631 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 GPC3P51654 580 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 NBR1Q14596 966 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
PABPC1-221ENST00000522720 EXOC8Q8IYI6 725 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 LINC01599Q8WXQ3 324 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 TSPYL2Q9H2G4 693 aaPredicted RBP18.33■□□□□ 0.52
PABPC1-221ENST00000522720 TMX1Q9H3N1 280 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 DHX33Q9H6R0 707 aaKnown RBP18.33■□□□□ 0.52
PABPC1-221ENST00000522720 ST3GAL5Q9UNP4 418 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 PCDHB6Q9Y5E3 794 aa18.33■□□□□ 0.52
PABPC1-221ENST00000522720 ZBTB39O15060 712 aa18.32■□□□□ 0.52
PABPC1-221ENST00000522720 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
PABPC1-221ENST00000522720 RFC5P40937 340 aa18.32■□□□□ 0.52
PABPC1-221ENST00000522720 FAM228AQ86W67 206 aa18.32■□□□□ 0.52
PABPC1-221ENST00000522720 SP7Q8TDD2 431 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-221ENST00000522720 SLC7A3Q8WY07 619 aa18.32■□□□□ 0.52
PABPC1-221ENST00000522720 GAS2L1Q99501 681 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-221ENST00000522720 SUCLA2Q9P2R7 463 aaPredicted RBP18.32■□□□□ 0.52
PABPC1-221ENST00000522720 LINC01553A4QN01 128 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 SPATA31C1P0DKV0 1188 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 XRCC6P12956 609 aaKnown RBP eCLIP18.31■□□□□ 0.52
PABPC1-221ENST00000522720 POLGP54098 1239 aaPredicted RBP18.31■□□□□ 0.52
PABPC1-221ENST00000522720 PTGDRQ13258 359 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 RILPL1Q5EBL4 403 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 XKR9Q5GH70 373 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 YME1L1Q96TA2 773 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 CERS4Q9HA82 394 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 ANKEF1Q9NU02 776 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 TRANK1O15050 2925 aa18.31■□□□□ 0.52
PABPC1-221ENST00000522720 LAD1O00515 517 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 DARSP14868 501 aaKnown RBP18.3■□□□□ 0.52
PABPC1-221ENST00000522720 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
PABPC1-221ENST00000522720 ERVK-21P61565 698 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 ADGRE1Q14246 886 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 PDIA5Q14554 519 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 SPRED2Q7Z698 418 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 CATSPER3Q86XQ3 398 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 CRIPAKQ8N1N5 446 aa18.3■□□□□ 0.52
PABPC1-221ENST00000522720 ERMNQ8TAM6 284 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms